BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023119
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...   296   1e-78
gb|ABV90886.1| DNA repair protein Rad50 [Triticum turgidum]           295   3e-78
gb|ABV90883.1| DNA repair protein Rad50 [Triticum monococcum]         295   3e-78
gb|ABV90882.1| DNA repair protein Rad50 [Triticum turgidum]           295   3e-78
gb|ABV90881.1| DNA repair protein Rad50 [Triticum turgidum]           295   3e-78

>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
           gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
           putative [Ricinus communis]
          Length = 1256

 Score =  296 bits (759), Expect = 1e-78
 Identities = 144/155 (92%), Positives = 152/155 (98%)
 Frame = +1

Query: 91  MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 270
           MSTVDKMLIKGIRS+ P+NKHV+TFFKPLTLIVG NGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1   MSTVDKMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 271 SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 450
           SGHSF+HDPKV G+TETKGQIKLRFKTAAGKDVVCIRSFQLTQKA+KME+KAIESVLQTI
Sbjct: 61  SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 451 NPHSGEKVCLSYRCADMDREIPALMGVSKAILENV 555
           NPH+GEKVCLSYRCADMDREIPALMGVSKAILENV
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENV 155


>gb|ABV90886.1| DNA repair protein Rad50 [Triticum turgidum]
          Length = 1316

 Score =  295 bits (755), Expect = 3e-78
 Identities = 144/155 (92%), Positives = 153/155 (98%)
 Frame = +1

Query: 91  MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 270
           MSTVDKMLIKGIRS+ P+NK+V+TFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPN+R
Sbjct: 1   MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60

Query: 271 SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 450
           SGH+FVHDPKV G+TETKGQIKLRFKTAAGKDVVCIRSFQLTQKA+KMEFKAIESVLQTI
Sbjct: 61  SGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEFKAIESVLQTI 120

Query: 451 NPHSGEKVCLSYRCADMDREIPALMGVSKAILENV 555
           NPH+GEKVCLSYRCADMDREIPALMGVSKAILENV
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENV 155


>gb|ABV90883.1| DNA repair protein Rad50 [Triticum monococcum]
          Length = 1316

 Score =  295 bits (755), Expect = 3e-78
 Identities = 144/155 (92%), Positives = 153/155 (98%)
 Frame = +1

Query: 91  MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 270
           MSTVDKMLIKGIRS+ P+NK+V+TFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPN+R
Sbjct: 1   MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60

Query: 271 SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 450
           SGH+FVHDPKV G+TETKGQIKLRFKTAAGKDVVCIRSFQLTQKA+KMEFKAIESVLQTI
Sbjct: 61  SGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEFKAIESVLQTI 120

Query: 451 NPHSGEKVCLSYRCADMDREIPALMGVSKAILENV 555
           NPH+GEKVCLSYRCADMDREIPALMGVSKAILENV
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENV 155


>gb|ABV90882.1| DNA repair protein Rad50 [Triticum turgidum]
          Length = 1316

 Score =  295 bits (755), Expect = 3e-78
 Identities = 144/155 (92%), Positives = 153/155 (98%)
 Frame = +1

Query: 91  MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 270
           MSTVDKMLIKGIRS+ P+NK+V+TFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPN+R
Sbjct: 1   MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60

Query: 271 SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 450
           SGH+FVHDPKV G+TETKGQIKLRFKTAAGKDVVCIRSFQLTQKA+KMEFKAIESVLQTI
Sbjct: 61  SGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEFKAIESVLQTI 120

Query: 451 NPHSGEKVCLSYRCADMDREIPALMGVSKAILENV 555
           NPH+GEKVCLSYRCADMDREIPALMGVSKAILENV
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENV 155


>gb|ABV90881.1| DNA repair protein Rad50 [Triticum turgidum]
          Length = 1316

 Score =  295 bits (755), Expect = 3e-78
 Identities = 144/155 (92%), Positives = 153/155 (98%)
 Frame = +1

Query: 91  MSTVDKMLIKGIRSYSPDNKHVVTFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNAR 270
           MSTVDKMLIKGIRS+ P+NK+V+TFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPN+R
Sbjct: 1   MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60

Query: 271 SGHSFVHDPKVKGDTETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEFKAIESVLQTI 450
           SGH+FVHDPKV G+TETKGQIKLRFKTAAGKDVVCIRSFQLTQKA+KMEFKAIESVLQTI
Sbjct: 61  SGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEFKAIESVLQTI 120

Query: 451 NPHSGEKVCLSYRCADMDREIPALMGVSKAILENV 555
           NPH+GEKVCLSYRCADMDREIPALMGVSKAILENV
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENV 155