BLASTX nr result
ID: Coptis24_contig00023108
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023108 (470 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18266.3| unnamed protein product [Vitis vinifera] 76 3e-12 emb|CAN77315.1| hypothetical protein VITISV_033355 [Vitis vinifera] 76 3e-12 ref|XP_002526811.1| protein with unknown function [Ricinus commu... 70 2e-10 ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-l... 62 5e-08 >emb|CBI18266.3| unnamed protein product [Vitis vinifera] Length = 1448 Score = 75.9 bits (185), Expect = 3e-12 Identities = 43/74 (58%), Positives = 49/74 (66%) Frame = -1 Query: 470 SLQCQPKSNELNGDVFCDDQFYEGLDLDALEAQATKLLKHKSELSMDRKQCDFPNPVTEK 291 SLQ Q + E NGDVF DDQFYEGLDLDA+EAQAT LL+HKSEL F + Sbjct: 1383 SLQHQAEKIETNGDVFYDDQFYEGLDLDAVEAQATMLLRHKSEL--------FTQKQDPQ 1434 Query: 290 GPELSHSPSFDLGI 249 +L SP+FDLGI Sbjct: 1435 SLDLFGSPTFDLGI 1448 >emb|CAN77315.1| hypothetical protein VITISV_033355 [Vitis vinifera] Length = 222 Score = 75.9 bits (185), Expect = 3e-12 Identities = 43/74 (58%), Positives = 49/74 (66%) Frame = -1 Query: 470 SLQCQPKSNELNGDVFCDDQFYEGLDLDALEAQATKLLKHKSELSMDRKQCDFPNPVTEK 291 SLQ Q + E NGDVF DDQFYEGLDLDA+EAQAT LL+HKSEL F + Sbjct: 157 SLQHQAEKIETNGDVFYDDQFYEGLDLDAVEAQATMLLRHKSEL--------FTQKQDPQ 208 Query: 290 GPELSHSPSFDLGI 249 +L SP+FDLGI Sbjct: 209 SLDLFGSPTFDLGI 222 >ref|XP_002526811.1| protein with unknown function [Ricinus communis] gi|223533815|gb|EEF35546.1| protein with unknown function [Ricinus communis] Length = 1351 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/73 (50%), Positives = 53/73 (72%) Frame = -1 Query: 467 LQCQPKSNELNGDVFCDDQFYEGLDLDALEAQATKLLKHKSELSMDRKQCDFPNPVTEKG 288 LQ ++++ NG++F DDQF+ LDLDA+EAQAT LLKH+SELS+ + D + + + Sbjct: 1281 LQDPVQNSDANGEIFHDDQFFANLDLDAVEAQATLLLKHRSELSVQKH--DAVSVSSIQN 1338 Query: 287 PELSHSPSFDLGI 249 +L +SPSFDLGI Sbjct: 1339 FDLQNSPSFDLGI 1351 >ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-like [Glycine max] Length = 1262 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/61 (59%), Positives = 41/61 (67%) Frame = -1 Query: 431 DVFCDDQFYEGLDLDALEAQATKLLKHKSELSMDRKQCDFPNPVTEKGPELSHSPSFDLG 252 DV CDDQFY LDLD LEAQAT LLK K +LS ++KQ P T ++ SPSFDLG Sbjct: 1204 DVLCDDQFYNDLDLDELEAQATLLLKQKLDLS-NQKQDTVPQSHT-SNLDIFQSPSFDLG 1261 Query: 251 I 249 I Sbjct: 1262 I 1262