BLASTX nr result

ID: Coptis24_contig00023089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023089
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16107.3| unnamed protein product [Vitis vinifera]              184   3e-44
ref|XP_002283328.2| PREDICTED: uncharacterized protein LOC100267...   182   1e-43
ref|XP_002533747.1| conserved hypothetical protein [Ricinus comm...   166   5e-39
ref|XP_002313428.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-37
ref|NP_001238491.1| uncharacterized protein LOC100500463 [Glycin...   160   5e-37

>emb|CBI16107.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  184 bits (466), Expect = 3e-44
 Identities = 105/191 (54%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
 Frame = -3

Query: 807 MAKRELSSTLKNLKFMQRAVQXXXXXXXXXEDDVNPS----SSNTQIRKCIVIMEGNPHP 640
           M+KRELSSTL+NLKFMQRA Q          ++V P     S NT  RKC+VI+EG+PHP
Sbjct: 1   MSKRELSSTLRNLKFMQRANQKEEKSKKE--EEVKPEDNFFSPNTVKRKCVVIVEGDPHP 58

Query: 639 GAVKGRMSFQSFNPSIDKLNEAAENPDQPKVSSANTGDANNFE-RENGSSCIGPDGSNGF 463
           GA KGRMSFQ+FNP+IDKLN+AA NP QP VS+  + + +    REN SS  G +  N  
Sbjct: 59  GATKGRMSFQNFNPAIDKLNDAA-NPCQPAVSATCSNNQSEKNCRENRSSLDGEESMNVD 117

Query: 462 KAESEYNGDLKRKNPESVTEVLYPNKSPKTASREGDQRSSPNNRNGSYKQKKHEKLDFNV 283
           K   + NGDLKRK PE V+E   P+KSPK    +G ++SSPNN  GS+KQ KHEKLD+NV
Sbjct: 118 KPNCDSNGDLKRKQPEEVSESQRPSKSPK--DDQGARKSSPNNSRGSHKQSKHEKLDWNV 175

Query: 282 LRRPNVENRKA 250
           LR P  +N++A
Sbjct: 176 LRPPKSQNKRA 186


>ref|XP_002283328.2| PREDICTED: uncharacterized protein LOC100267367 [Vitis vinifera]
          Length = 183

 Score =  182 bits (461), Expect = 1e-43
 Identities = 105/190 (55%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
 Frame = -3

Query: 807 MAKRELSSTLKNLKFMQRAVQXXXXXXXXXEDDVNPS----SSNTQIRKCIVIMEGNPHP 640
           M+KRELSSTL+NLKFMQRA Q          ++V P     S NT  RKC+VI+EG+PHP
Sbjct: 1   MSKRELSSTLRNLKFMQRANQKEEKSKKE--EEVKPEDNFFSPNTVKRKCVVIVEGDPHP 58

Query: 639 GAVKGRMSFQSFNPSIDKLNEAAENPDQPKVSSANTGDANNFERENGSSCIGPDGSNGFK 460
           GA KGRMSFQ+FNP+IDKLN+AA NP QP VS+  T   N  E+   SS  G +  N  K
Sbjct: 59  GATKGRMSFQNFNPAIDKLNDAA-NPCQPAVSA--TCSNNQSEKNCRSSLDGEESMNVDK 115

Query: 459 AESEYNGDLKRKNPESVTEVLYPNKSPKTASREGDQRSSPNNRNGSYKQKKHEKLDFNVL 280
              + NGDLKRK PE V+E   P+KSPK    +G ++SSPNN  GS+KQ KHEKLD+NVL
Sbjct: 116 PNCDSNGDLKRKQPEEVSESQRPSKSPK--DDQGARKSSPNNSRGSHKQSKHEKLDWNVL 173

Query: 279 RRPNVENRKA 250
           R P  +N++A
Sbjct: 174 RPPKSQNKRA 183


>ref|XP_002533747.1| conserved hypothetical protein [Ricinus communis]
           gi|223526335|gb|EEF28634.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  166 bits (421), Expect = 5e-39
 Identities = 104/191 (54%), Positives = 126/191 (65%), Gaps = 7/191 (3%)
 Frame = -3

Query: 807 MAKRELSSTLKNLKFMQRAV--QXXXXXXXXXEDDVNPSSSNTQIRKCIVIMEGNPHPGA 634
           MAKRE+SSTL+NLKFMQRAV  +         + D N  S  T IRKC+VIMEG+PHPGA
Sbjct: 1   MAKREISSTLRNLKFMQRAVVREEKAKKQEEEKPDGNFFSPGT-IRKCVVIMEGDPHPGA 59

Query: 633 VKGRMSFQSFNPSIDKLNEAAENPDQPKVS----SANTGDANNFE-RENGSSCIGPDGSN 469
             GRMSFQSFNPS+DKLNE   N  QPKVS    S ++G +     R NGSS  G + SN
Sbjct: 60  SIGRMSFQSFNPSVDKLNEDTTNLGQPKVSDVYVSTSSGQSGGTSFRGNGSSLNGAECSN 119

Query: 468 GFKAESEYNGDLKRKNPESVTEVLYPNKSPKTASREGDQRSSPNNRNGSYKQKKHEKLDF 289
              A+S+  GDLKRK  + V E  + NKSPKT   EG Q+SSPN+  GS+KQ K EKLD+
Sbjct: 120 TGNAKSD--GDLKRKQSDVVPESPHKNKSPKT---EGSQQSSPNSNKGSFKQPKREKLDW 174

Query: 288 NVLRRPNVENR 256
           +VLR  +  N+
Sbjct: 175 SVLRPKSQNNQ 185


>ref|XP_002313428.1| predicted protein [Populus trichocarpa] gi|222849836|gb|EEE87383.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  160 bits (406), Expect = 3e-37
 Identities = 98/188 (52%), Positives = 120/188 (63%), Gaps = 4/188 (2%)
 Frame = -3

Query: 807 MAKRELSSTLKNLKFMQRAVQXXXXXXXXXEDDVNPSS---SNTQIRKCIVIMEGNPHPG 637
           MAKRELSSTLKNLKFMQRAVQ          ++V P     S   I+KC+V+MEG+PHPG
Sbjct: 1   MAKRELSSTLKNLKFMQRAVQREEKTKKQE-EEVKPDGNFFSPGTIKKCVVVMEGDPHPG 59

Query: 636 AVKGRMSFQSFNPSIDKLNEAAEN-PDQPKVSSANTGDANNFERENGSSCIGPDGSNGFK 460
           AV GRMSFQSFNPS+DKL EAA N     + S+++         EN SS  G + SN  K
Sbjct: 60  AVLGRMSFQSFNPSVDKLKEAAANEASDARASTSSYQSGRTSFSENESSPEGVECSNTAK 119

Query: 459 AESEYNGDLKRKNPESVTEVLYPNKSPKTASREGDQRSSPNNRNGSYKQKKHEKLDFNVL 280
             SE NGD KRK  E  +E+ + NKSPK   ++G Q SSPN+  GS+KQ K  KLD+NVL
Sbjct: 120 PSSEANGDHKRKQYELASEIQHQNKSPKMV-QDGHQ-SSPNSSKGSFKQPKRGKLDWNVL 177

Query: 279 RRPNVENR 256
           R  +  N+
Sbjct: 178 RPKSQHNQ 185


>ref|NP_001238491.1| uncharacterized protein LOC100500463 [Glycine max]
           gi|255630391|gb|ACU15552.1| unknown [Glycine max]
          Length = 187

 Score =  160 bits (404), Expect = 5e-37
 Identities = 92/189 (48%), Positives = 118/189 (62%), Gaps = 4/189 (2%)
 Frame = -3

Query: 807 MAKRELSSTLKNLKFMQRAV--QXXXXXXXXXEDDVNPSSSNTQIRKCIVIMEGNPHPGA 634
           MA+RELSSTLKNLKFMQRA   +           DV+  +S    RKC+VIMEG+PHPGA
Sbjct: 1   MARRELSSTLKNLKFMQRAALREEKTKKEEEIRPDVSVGTSTAVTRKCVVIMEGDPHPGA 60

Query: 633 VKGRMSFQSFNPSIDKLNEAAENPDQP--KVSSANTGDANNFERENGSSCIGPDGSNGFK 460
            KGRM FQSFNPS+DKLNE      QP  + + +   +AN   REN SS  GP+ +N  K
Sbjct: 61  PKGRMPFQSFNPSVDKLNEEEARLHQPAAETTMSRNQNANINIRENSSSVEGPECANMDK 120

Query: 459 AESEYNGDLKRKNPESVTEVLYPNKSPKTASREGDQRSSPNNRNGSYKQKKHEKLDFNVL 280
              E NG++KRK  E + E  YPNKSPK  +   D++S PNN  G+ K+   +KLD+ VL
Sbjct: 121 KSVEVNGNVKRKQSEVICEAQYPNKSPK--NDHDDKQSLPNNSLGTLKKPSGDKLDWKVL 178

Query: 279 RRPNVENRK 253
           R  +V+  +
Sbjct: 179 RPSSVKQSR 187


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