BLASTX nr result

ID: Coptis24_contig00023086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023086
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523284.1| expressed protein, putative [Ricinus communi...    74   2e-11
ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258...    71   1e-10
ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
emb|CBI32690.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802...    64   2e-08

>ref|XP_002523284.1| expressed protein, putative [Ricinus communis]
           gi|223537497|gb|EEF39123.1| expressed protein, putative
           [Ricinus communis]
          Length = 282

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
 Frame = +3

Query: 213 PGVGSSGKSD-EANDLTYSQICQPVDENLLIVGVK----RSEMVDNVLHELFQNGNVTLQ 377
           P V SS K D E N   YS +  PV ENLL   VK    R  MVD +LHEL Q+G+   +
Sbjct: 71  PSVNSSSKKDMEENGPAYSLLSHPVHENLLRTNVKFQSNRGSMVDMILHELLQHGDSAQK 130

Query: 378 YMRGSRSMSIEKRILIDGFIQGRG 449
           YM+GS+S  ++  IL+D ++QGRG
Sbjct: 131 YMQGSKSKKLDNWILLDNYVQGRG 154


>ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258470 [Vitis vinifera]
          Length = 300

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
 Frame = +3

Query: 213 PGVGSSGKSD-EANDLTYSQICQPVDENLLIVGVK----RSEMVDNVLHELFQNGNVTLQ 377
           P + +S K D EAN   YSQ+ Q V ENLL    K    R    D +LH+L +NG+   +
Sbjct: 70  PTLNASLKKDVEANGPAYSQLSQTVHENLLATNAKITSKRGSTADKILHDLLKNGDSAHK 129

Query: 378 YMRGSRSMSIEKRILIDGFIQGRGAS 455
           YM GSRSM  +  IL+D  +QGRGAS
Sbjct: 130 YMMGSRSMKFDNWILLDNVVQGRGAS 155


>ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|222844979|gb|EEE82526.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +3

Query: 213 PGVGSSGKSDEANDLTYSQICQPVDENLLIVGVK----RSEMVDNVLHELFQNGNVTLQY 380
           P    S K  E N L YSQ+ Q   ENLL  GVK    +  +VD +LHELFQ+G+ + +Y
Sbjct: 61  PSSSLSKKDPEENGLAYSQLPQAAHENLLTTGVKFESKKGSVVDKILHELFQHGDASQKY 120

Query: 381 MRGSRSMSIEKRILIDGFIQGR 446
           M+GSR++ I+  IL+D ++  +
Sbjct: 121 MQGSRNIKIDNWILLDNYVPSK 142


>emb|CBI32690.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
 Frame = +3

Query: 243 EANDLTYSQICQPVDENLLIVGVK----RSEMVDNVLHELFQNGNVTLQYMRGSRSMSIE 410
           EAN   YSQ+ Q V ENLL    K    R    D +LH+L +NG+   +YM GSRSM  +
Sbjct: 87  EANGPAYSQLSQTVHENLLATNAKITSKRGSTADKILHDLLKNGDSAHKYMMGSRSMKFD 146

Query: 411 KRILIDGFIQGRGAS 455
             IL+D  +QGRGAS
Sbjct: 147 NWILLDNVVQGRGAS 161


>ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802747 [Glycine max]
          Length = 300

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
 Frame = +3

Query: 162 SKTLVSKKGCVAFVGYMPGVGSSGKSDEANDLTYSQICQPVDENLLIVG----VKRSEMV 329
           S ++ SKKG  +F G+      +   D  +   Y+Q+  PV+ NLL        +R   +
Sbjct: 59  SSSVSSKKGNFSFSGH------TTLQDIEDGPAYAQLSVPVNGNLLTTNEEFSAERGGSI 112

Query: 330 DNVLHELFQNGNVTLQYMRGSRSMSIEKRILIDGFIQGR 446
           D +LHEL Q G+   +YM+GSR+M I+  IL+D ++QGR
Sbjct: 113 DGILHELLQKGDAAHKYMQGSRNMKIDNWILLDNYVQGR 151


Top