BLASTX nr result

ID: Coptis24_contig00023070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023070
         (1164 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280615.1| PREDICTED: ABC transporter I family member 1...   363   6e-98
ref|XP_002306244.1| predicted protein [Populus trichocarpa] gi|2...   349   9e-94
emb|CBI37536.3| unnamed protein product [Vitis vinifera]              345   1e-92
ref|XP_004147344.1| PREDICTED: ABC transporter I family member 1...   343   4e-92
ref|XP_004165768.1| PREDICTED: ABC transporter I family member 1...   342   8e-92

>ref|XP_002280615.1| PREDICTED: ABC transporter I family member 10, chloroplastic [Vitis
            vinifera]
          Length = 271

 Score =  363 bits (931), Expect = 6e-98
 Identities = 186/269 (69%), Positives = 222/269 (82%), Gaps = 9/269 (3%)
 Frame = -3

Query: 1069 MSHSALMRASAYFSP-LHAAAPTSNV--------VTENLAIEGRNLSYTVKTKTGKCVPI 917
            M++SAL R+SA   P LH+  PT +V        VT+N AIEG++L+Y+V T+ G+  PI
Sbjct: 1    MNYSALSRSSALHLPNLHSTNPTRSVSLSIRSCIVTQNDAIEGQSLNYSVTTRLGQLTPI 60

Query: 916  LKDCSLHIPSGQLWMLLGPNGCGKSTLLKVLAGLLKPTHGTLYVKRPRSFVFQNPDHQVV 737
            LKDCS+ IPSGQLWMLLGPNGCGKSTLLK+LAGLL PT GTLYVK+P+SFVFQNPDHQVV
Sbjct: 61   LKDCSIRIPSGQLWMLLGPNGCGKSTLLKILAGLLNPTSGTLYVKKPKSFVFQNPDHQVV 120

Query: 736  LPTVEADVAFGLGKVNLTQDEVKARVAKALDAVGMSDYLQRPVQTLSGGQKQRVAIAGAL 557
            +PTVEADVAFGLGK NLT +EV++RV+KALDAVG+SDY+QRPVQTLSGGQKQRVAIAGAL
Sbjct: 121  MPTVEADVAFGLGKFNLTIEEVRSRVSKALDAVGISDYMQRPVQTLSGGQKQRVAIAGAL 180

Query: 556  AEACKVXXXXXXXXXXXESEQIGVIKAVKNSLSGLEEVTALWVTHRLEELEYADGAVYME 377
            AEACKV           E++Q+GVIKAVKNS+    EVTALWVTHR+EELEYADGAVYME
Sbjct: 181  AEACKVLLLDELTTFLDENDQVGVIKAVKNSVDSSGEVTALWVTHRMEELEYADGAVYME 240

Query: 376  DGKVIMHSDASSIRGFLKERISSYTDKIK 290
            DG+V+MH +A+SI  F+K R SSY +++K
Sbjct: 241  DGRVVMHGNAASIMDFVKARQSSYLNQLK 269


>ref|XP_002306244.1| predicted protein [Populus trichocarpa] gi|222855693|gb|EEE93240.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  349 bits (895), Expect = 9e-94
 Identities = 172/231 (74%), Positives = 200/231 (86%)
 Frame = -3

Query: 985 NLAIEGRNLSYTVKTKTGKCVPILKDCSLHIPSGQLWMLLGPNGCGKSTLLKVLAGLLKP 806
           N+AIEGRNL++++KT+ G  VPILKDCSL IPSGQLWMLLGPNGCGKSTLLK+LAGLL P
Sbjct: 9   NIAIEGRNLNFSIKTRKGDLVPILKDCSLSIPSGQLWMLLGPNGCGKSTLLKILAGLLNP 68

Query: 805 THGTLYVKRPRSFVFQNPDHQVVLPTVEADVAFGLGKVNLTQDEVKARVAKALDAVGMSD 626
           T GTLY+KRP+SFVFQNPDHQVV+PTVEADV+FGLGK+NLT+DEVK  V+KALDAVGMS 
Sbjct: 69  TSGTLYLKRPKSFVFQNPDHQVVMPTVEADVSFGLGKLNLTEDEVKCTVSKALDAVGMSA 128

Query: 625 YLQRPVQTLSGGQKQRVAIAGALAEACKVXXXXXXXXXXXESEQIGVIKAVKNSLSGLEE 446
           Y+QRPVQTLSGGQKQRVAIAGALAEACKV           E++Q+GVIKAVKNSL+  ++
Sbjct: 129 YMQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVKNSLNASDD 188

Query: 445 VTALWVTHRLEELEYADGAVYMEDGKVIMHSDASSIRGFLKERISSYTDKI 293
           VTALWVTHRLEELEYADGA+YME+GKV+   D SSI  F++ R SSY ++I
Sbjct: 189 VTALWVTHRLEELEYADGALYMENGKVVKQGDGSSIMNFIEARQSSYINRI 239


>emb|CBI37536.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  345 bits (886), Expect = 1e-92
 Identities = 177/251 (70%), Positives = 207/251 (82%), Gaps = 9/251 (3%)
 Frame = -3

Query: 1069 MSHSALMRASAYFSP-LHAAAPTSNV--------VTENLAIEGRNLSYTVKTKTGKCVPI 917
            M++SAL R+SA   P LH+  PT +V        VT+N AIEG++L+Y+V T+ G+  PI
Sbjct: 1    MNYSALSRSSALHLPNLHSTNPTRSVSLSIRSCIVTQNDAIEGQSLNYSVTTRLGQLTPI 60

Query: 916  LKDCSLHIPSGQLWMLLGPNGCGKSTLLKVLAGLLKPTHGTLYVKRPRSFVFQNPDHQVV 737
            LKDCS+ IPSGQLWMLLGPNGCGKSTLLK+LAGLL PT GTLYVK+P+SFVFQNPDHQVV
Sbjct: 61   LKDCSIRIPSGQLWMLLGPNGCGKSTLLKILAGLLNPTSGTLYVKKPKSFVFQNPDHQVV 120

Query: 736  LPTVEADVAFGLGKVNLTQDEVKARVAKALDAVGMSDYLQRPVQTLSGGQKQRVAIAGAL 557
            +PTVEADVAFGLGK NLT +EV++RV+KALDAVG+SDY+QRPVQTLSGGQKQRVAIAGAL
Sbjct: 121  MPTVEADVAFGLGKFNLTIEEVRSRVSKALDAVGISDYMQRPVQTLSGGQKQRVAIAGAL 180

Query: 556  AEACKVXXXXXXXXXXXESEQIGVIKAVKNSLSGLEEVTALWVTHRLEELEYADGAVYME 377
            AEACKV           E++Q+GVIKAVKNS+    EVTALWVTHR+EELEYADGAVYME
Sbjct: 181  AEACKVLLLDELTTFLDENDQVGVIKAVKNSVDSSGEVTALWVTHRMEELEYADGAVYME 240

Query: 376  DGKVIMHSDAS 344
            DG+V+MH   S
Sbjct: 241  DGRVVMHGSRS 251


>ref|XP_004147344.1| PREDICTED: ABC transporter I family member 10, chloroplastic-like
            [Cucumis sativus]
          Length = 267

 Score =  343 bits (881), Expect = 4e-92
 Identities = 173/262 (66%), Positives = 206/262 (78%)
 Frame = -3

Query: 1078 VNSMSHSALMRASAYFSPLHAAAPTSNVVTENLAIEGRNLSYTVKTKTGKCVPILKDCSL 899
            + S S + +  +    SPL +  P+    TEN+AIEGRNL++++ TK GK VPIL+DCSL
Sbjct: 3    LKSSSFNLVAPSPPLLSPLFSNPPSRINTTENIAIEGRNLNFSITTKQGKSVPILRDCSL 62

Query: 898  HIPSGQLWMLLGPNGCGKSTLLKVLAGLLKPTHGTLYVKRPRSFVFQNPDHQVVLPTVEA 719
             IPSG+ WMLLGPNGCGKSTLLKVLAGLL  T G +YVK+P+ FVFQNPD+QVV+PTVEA
Sbjct: 63   RIPSGEFWMLLGPNGCGKSTLLKVLAGLLNTTSGAVYVKKPKCFVFQNPDYQVVMPTVEA 122

Query: 718  DVAFGLGKVNLTQDEVKARVAKALDAVGMSDYLQRPVQTLSGGQKQRVAIAGALAEACKV 539
            DVAFGLGK+NL  DEVK+RV +AL AVGMS YLQR VQTLSGGQKQRVAIAGALAEACKV
Sbjct: 123  DVAFGLGKLNLNNDEVKSRVLEALSAVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKV 182

Query: 538  XXXXXXXXXXXESEQIGVIKAVKNSLSGLEEVTALWVTHRLEELEYADGAVYMEDGKVIM 359
                       E++Q GVIKAV+NSL   E+VTALWVTHRLEELEYADGA+YMEDGKV+M
Sbjct: 183  LLLDELTTFLDENDQTGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVVM 242

Query: 358  HSDASSIRGFLKERISSYTDKI 293
            H D +SI+ F++ + S Y  +I
Sbjct: 243  HGDVASIQSFIQTKQSDYIKRI 264


>ref|XP_004165768.1| PREDICTED: ABC transporter I family member 10, chloroplastic-like
            [Cucumis sativus]
          Length = 267

 Score =  342 bits (878), Expect = 8e-92
 Identities = 172/262 (65%), Positives = 207/262 (79%)
 Frame = -3

Query: 1078 VNSMSHSALMRASAYFSPLHAAAPTSNVVTENLAIEGRNLSYTVKTKTGKCVPILKDCSL 899
            + S S + +  +    SPL +  P+    TEN+AIEGR+L++++ TK GK VPIL+DCSL
Sbjct: 3    LKSSSFNLVAPSPPLLSPLFSNPPSRINTTENIAIEGRDLNFSITTKQGKSVPILRDCSL 62

Query: 898  HIPSGQLWMLLGPNGCGKSTLLKVLAGLLKPTHGTLYVKRPRSFVFQNPDHQVVLPTVEA 719
             IPSG+ WMLLGPNGCGKSTLLKVLAGLL  T G +YVK+P+ FVFQNPD+QVV+PTVEA
Sbjct: 63   RIPSGEFWMLLGPNGCGKSTLLKVLAGLLNTTSGAVYVKKPKCFVFQNPDYQVVMPTVEA 122

Query: 718  DVAFGLGKVNLTQDEVKARVAKALDAVGMSDYLQRPVQTLSGGQKQRVAIAGALAEACKV 539
            DVAFGLGK+NL  DEVK+RV +AL AVGMS YLQR VQTLSGGQKQRVAIAGALAEACKV
Sbjct: 123  DVAFGLGKLNLNNDEVKSRVLEALSAVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKV 182

Query: 538  XXXXXXXXXXXESEQIGVIKAVKNSLSGLEEVTALWVTHRLEELEYADGAVYMEDGKVIM 359
                       E++Q+GVIKAV+NSL   E+VTALWVTHRLEELEYADGA+YMEDGKV+M
Sbjct: 183  LLLDELTTFLDENDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVVM 242

Query: 358  HSDASSIRGFLKERISSYTDKI 293
            H D +SI+ F++ + S Y  +I
Sbjct: 243  HGDVASIQSFIQTKQSDYIKRI 264


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