BLASTX nr result

ID: Coptis24_contig00023062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023062
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g...   162   3e-38
ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140...   157   6e-37
gb|ACU24035.1| unknown [Glycine max]                                  157   6e-37
ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140...   155   2e-36

>ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/87 (89%), Positives = 84/87 (96%)
 Frame = +2

Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418
           AEKKKVLI+NTNSGGHAVIGFYFAKELL SGHEVT+LTVGEESSDKMKKPPF+RFSEIVS
Sbjct: 75  AEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKKPPFSRFSEIVS 134

Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499
           +GG+TVWGNPA+VGKVV G AFDVVLD
Sbjct: 135 AGGKTVWGNPAEVGKVVEGAAFDVVLD 161


>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
           gi|355479697|gb|AES60900.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 401

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/87 (89%), Positives = 82/87 (94%)
 Frame = +2

Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418
           AEKKKVLIINTNSGGHAVIGFYFAKELL +GH VT+LTVG+ESSDKMKKPPFNRFSEIVS
Sbjct: 72  AEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIVS 131

Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499
           +GG TVWGNPADVG VVGG AFDVVLD
Sbjct: 132 AGGSTVWGNPADVGSVVGGEAFDVVLD 158


>ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
           [Glycine max]
          Length = 403

 Score =  157 bits (398), Expect = 6e-37
 Identities = 74/87 (85%), Positives = 80/87 (91%)
 Frame = +2

Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418
           AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVGEE SDKMKKPPFNRFSEIVS
Sbjct: 74  AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVS 133

Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499
           +GG TVWGNPA+VG VVGG  FDVVLD
Sbjct: 134 AGGRTVWGNPAEVGSVVGGEVFDVVLD 160


>gb|ACU24035.1| unknown [Glycine max]
          Length = 403

 Score =  157 bits (398), Expect = 6e-37
 Identities = 74/87 (85%), Positives = 80/87 (91%)
 Frame = +2

Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418
           AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVGEE SDKMKKPPFNRFSEIVS
Sbjct: 74  AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVS 133

Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499
           +GG TVWGNPA+VG VVGG  FDVVLD
Sbjct: 134 AGGRTVWGNPAEVGSVVGGEVFDVVLD 160


>ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
           [Glycine max]
          Length = 404

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/87 (83%), Positives = 79/87 (90%)
 Frame = +2

Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418
           AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVG+E SDKMKKPPFNRFSEIVS
Sbjct: 75  AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVS 134

Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499
           +GG TVWGNPA VG VVGG  FDVVLD
Sbjct: 135 AGGRTVWGNPAQVGSVVGGEVFDVVLD 161


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