BLASTX nr result
ID: Coptis24_contig00023062
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023062 (501 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|2... 162 3e-38 ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g... 162 3e-38 ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140... 157 6e-37 gb|ACU24035.1| unknown [Glycine max] 157 6e-37 ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140... 155 2e-36 >ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa] Length = 404 Score = 162 bits (410), Expect = 3e-38 Identities = 78/87 (89%), Positives = 84/87 (96%) Frame = +2 Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418 AEKKKVLI+NTNSGGHAVIGFYFAKELL SGHEVT+LTVGEESSDKMKKPPF+RFSEIVS Sbjct: 75 AEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKKPPFSRFSEIVS 134 Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499 +GG+TVWGNPA+VGKVV G AFDVVLD Sbjct: 135 AGGKTVWGNPAEVGKVVEGAAFDVVLD 161 >ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] gi|355479697|gb|AES60900.1| MRNA-binding protein [Medicago truncatula] Length = 401 Score = 162 bits (409), Expect = 3e-38 Identities = 78/87 (89%), Positives = 82/87 (94%) Frame = +2 Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418 AEKKKVLIINTNSGGHAVIGFYFAKELL +GH VT+LTVG+ESSDKMKKPPFNRFSEIVS Sbjct: 72 AEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIVS 131 Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499 +GG TVWGNPADVG VVGG AFDVVLD Sbjct: 132 AGGSTVWGNPADVGSVVGGEAFDVVLD 158 >ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like [Glycine max] Length = 403 Score = 157 bits (398), Expect = 6e-37 Identities = 74/87 (85%), Positives = 80/87 (91%) Frame = +2 Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418 AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVGEE SDKMKKPPFNRFSEIVS Sbjct: 74 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVS 133 Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499 +GG TVWGNPA+VG VVGG FDVVLD Sbjct: 134 AGGRTVWGNPAEVGSVVGGEVFDVVLD 160 >gb|ACU24035.1| unknown [Glycine max] Length = 403 Score = 157 bits (398), Expect = 6e-37 Identities = 74/87 (85%), Positives = 80/87 (91%) Frame = +2 Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418 AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVGEE SDKMKKPPFNRFSEIVS Sbjct: 74 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVS 133 Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499 +GG TVWGNPA+VG VVGG FDVVLD Sbjct: 134 AGGRTVWGNPAEVGSVVGGEVFDVVLD 160 >ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like [Glycine max] Length = 404 Score = 155 bits (393), Expect = 2e-36 Identities = 73/87 (83%), Positives = 79/87 (90%) Frame = +2 Query: 239 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 418 AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVG+E SDKMKKPPFNRFSEIVS Sbjct: 75 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVS 134 Query: 419 SGGETVWGNPADVGKVVGGVAFDVVLD 499 +GG TVWGNPA VG VVGG FDVVLD Sbjct: 135 AGGRTVWGNPAQVGSVVGGEVFDVVLD 161