BLASTX nr result

ID: Coptis24_contig00023051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023051
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530365.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...    95   8e-18
ref|XP_002513297.1| strubbelig receptor, putative [Ricinus commu...    94   1e-17
ref|XP_002310348.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003604115.1| Protein STRUBBELIG-RECEPTOR FAMILY [Medicago...    89   6e-16
ref|XP_002269717.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...    84   1e-14

>ref|XP_003530365.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like [Glycine max]
          Length = 1038

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
 Frame = +1

Query: 43   DVENNRFTGSVPEKLRDIDTIITGGNAFSSGAXXXXXXXXXXXXXXXXXPXXXXXXXXXX 222
            +VENN+FTG VPE+L++I+ + TGGN++SSG                             
Sbjct: 575  NVENNKFTGWVPEELKEINNLQTGGNSWSSGPAPPPPPGTPPIKHSEKKNDKSVISGIAI 634

Query: 223  XXXXXXXXXXSFIP------KSSSSATHYLEDERLSQRRSFTPLVSRELSIGKPNNFKEM 384
                        I       +SS +++H+++++R SQ RSFTPL S+ELS  K +    M
Sbjct: 635  AGIAFGVLAVIIIVVALSKRRSSKTSSHFIDEDRNSQHRSFTPLASQELS--KDSGHDSM 692

Query: 385  KTLEPSPSVKVKSLQISPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIR 537
                 S S+ VK+LQ SPS+ ++   S+ V S +D EFA+RLN +RSTSIR
Sbjct: 693  D----STSIDVKALQKSPSVSVRSSVSDCVQSFNDNEFANRLNSKRSTSIR 739


>ref|XP_002513297.1| strubbelig receptor, putative [Ricinus communis]
           gi|223547205|gb|EEF48700.1| strubbelig receptor,
           putative [Ricinus communis]
          Length = 694

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
 Frame = +1

Query: 43  DVENNRFTGSVPEKLRDIDTIITGGNAFSSGAXXXXXXXXXXXXXXXXXPXXXXXXXXXX 222
           DVE+N F+G VP++L  I+ I TGGN++SSG                             
Sbjct: 214 DVEDNEFSGWVPDELEGIENIETGGNSWSSGPAPPPPPGAKSISAKQKEHEKGAGGKDGM 273

Query: 223 XXXXXXXXXXS-----------FIPKSSSSATHYLEDERLSQRRSFTPLVSRELSIGKPN 369
                     +           F  + SS ++H+L++ER SQRR+FTPL S+ELS     
Sbjct: 274 SGLSIALIVLASLVVVALLIILFSTRKSSPSSHFLDEERASQRRAFTPLSSQELS----- 328

Query: 370 NFKEMKTLEP--SPSVKVKSLQISPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIRA 540
              +    EP  S ++ +K++Q SPS+  K P S+   SL+D EFAS LN RR+TS+RA
Sbjct: 329 --NDSHKTEPFDSIAIDIKTMQKSPSVSYKPPHSDFAQSLNDNEFASHLNARRNTSVRA 385


>ref|XP_002310348.1| predicted protein [Populus trichocarpa] gi|222853251|gb|EEE90798.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
 Frame = +1

Query: 43  DVENNRFTGSVPEKLRDIDTIITGGNAFSSGAXXXXXXXXXXXXXXXXXPXXXXXXXXXX 222
           ++++N FTG VP+ L  ID + TGGNA+SSG                             
Sbjct: 214 NIKDNEFTGWVPDSLNGIDNLETGGNAWSSGPAPRGKSSSAHGKGSGKGGMNGLAIALIV 273

Query: 223 XXXXXXXXXXSFI--PKSSSSATHYLEDERLSQRRSFTPLVSRELS----IGKPNNFKEM 384
                       +   + SS ++++LE++  S  R+FTPL S ELS          FKE+
Sbjct: 274 LASLVVVGLLIILLSKRRSSPSSNFLEEDNGSWHRAFTPLSSHELSNDTRAAIKKEFKEI 333

Query: 385 KTLEPSPSVKVKSLQISPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIRA 540
           + +  S S+ +K+LQ +PS+G K PPS+   S+SD EFA RLN  R+TS+R+
Sbjct: 334 EPINLSGSIDIKNLQKAPSVGYKPPPSDFSESISDNEFAIRLNAGRNTSVRS 385


>ref|XP_003604115.1| Protein STRUBBELIG-RECEPTOR FAMILY [Medicago truncatula]
           gi|355505170|gb|AES86312.1| Protein STRUBBELIG-RECEPTOR
           FAMILY [Medicago truncatula]
          Length = 790

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
 Frame = +1

Query: 43  DVENNRFTGSVPEKLRDIDTIITGGNAFSSGAXXXXXXXXXXXXXXXXXPXXXXXXXXXX 222
           +VENN+FTG +PE+L+DI+++ TGGN++ +G                             
Sbjct: 305 NVENNKFTGWIPEELKDINSLQTGGNSWKTGPAPPPPPGTPPIKHHSEEKEGKSSNSLVT 364

Query: 223 XXXXXXXXXXSFIP----------KSSSSATHYLEDERLSQRRSFTPLVSRELSI---GK 363
                     + +           KSS +++ ++++ER SQ RSFTPL S+EL+    G 
Sbjct: 365 GLIIAGIAFGALVVIILIAALFKRKSSYASSRFIDEERRSQHRSFTPLASQELTKDLGGN 424

Query: 364 PNNFKEMKTLEPSPSVKVKSLQISPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIR 537
              +K  K ++ S S+ + +LQ +PS+ ++   S+ V + +D EFA+RLN R+S SIR
Sbjct: 425 DTEYKGFKAMD-STSIDIMALQKNPSVSVRSSVSDCVQNFNDNEFANRLNSRKSASIR 481


>ref|XP_002269717.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like [Vitis
           vinifera]
          Length = 1068

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = +1

Query: 256 FIPKSSSSATHYLEDERLSQRRSFTPLVSRELSIGK-PNNFKEMKTLEPSPSVKVKSLQI 432
           F  +SS   +H+L++ERLS  R FTP+VS+ELS    P N+ + K+   S S+ VK+LQ 
Sbjct: 681 FSRRSSPPPSHFLDEERLSNHRPFTPIVSQELSNDMHPTNYNDFKSSNSSNSMDVKALQK 740

Query: 433 SPSMGLKRPPSEHVSSLSDAEFASRLNVRRSTSIRA 540
           SPS+GLKRPPS +       + A+RL+V+RSTSIRA
Sbjct: 741 SPSIGLKRPPSLN-------DLANRLSVKRSTSIRA 769


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