BLASTX nr result

ID: Coptis24_contig00023031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023031
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285380.2| PREDICTED: HAUS augmin-like complex subunit ...    63   3e-08
ref|XP_002264816.2| PREDICTED: HAUS augmin-like complex subunit ...    57   2e-06

>ref|XP_002285380.2| PREDICTED: HAUS augmin-like complex subunit 1-like [Vitis vinifera]
           gi|147795301|emb|CAN69456.1| hypothetical protein
           VITISV_036572 [Vitis vinifera]
           gi|296083695|emb|CBI23684.3| unnamed protein product
           [Vitis vinifera]
          Length = 298

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/45 (66%), Positives = 37/45 (82%)
 Frame = -1

Query: 136 MSDLISTADPSVVEGKSSGFDTAHIAQVKTWLASQFEALGKDVPD 2
           MSD+IS +DPSV+E KS+ FD+  I+ VK WLASQF+A GKDVPD
Sbjct: 1   MSDIISGSDPSVIESKSN-FDSGRISDVKAWLASQFDAAGKDVPD 44


>ref|XP_002264816.2| PREDICTED: HAUS augmin-like complex subunit 1-like [Vitis vinifera]
           gi|296084427|emb|CBI24986.3| unnamed protein product
           [Vitis vinifera]
          Length = 298

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -1

Query: 136 MSDLISTADPSVVEGKSSGFDTAHIAQVKTWLASQFEALGKDVPD 2
           MSD IS +DPSV+E +S+ FD+  I+ VK WLASQ++A GKDVPD
Sbjct: 1   MSDNISGSDPSVIEIESN-FDSGRISDVKAWLASQYDAAGKDVPD 44


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