BLASTX nr result
ID: Coptis24_contig00023013
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023013 (409 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004136299.1| PREDICTED: GTP-binding protein At2g22870-lik... 172 2e-41 ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thali... 172 2e-41 ref|XP_004163505.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ... 172 3e-41 ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subs... 172 3e-41 ref|XP_002516578.1| GTP-binding protein engB, putative [Ricinus ... 172 3e-41 >ref|XP_004136299.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus] Length = 316 Score = 172 bits (437), Expect = 2e-41 Identities = 86/111 (77%), Positives = 93/111 (83%) Frame = +3 Query: 75 EEPQVEISLEKLFIPPETDTGSLLSTRILKGSNIVLSKYASSAQIEQADFVKSSTTTEQC 254 EE Q+ IS EKLF+PP+TD RILKGSNIVL +YA AQ+ QADFVKSS TE C Sbjct: 69 EETQLPISPEKLFVPPDTDISGGGGARILKGSNIVLGRYARDAQVSQADFVKSSVRTEDC 128 Query: 255 PSDGLPEFAFVGRSNVGKSSLVNSIVRRKKLALTSKKPGKTQCINHFRIND 407 PSDGLPEFA VGRSNVGKSSL+NS+VRRKKLALTSKKPGKTQCINHFRIND Sbjct: 129 PSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRIND 179 >ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thaliana] gi|7573405|emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana] gi|16648724|gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana] gi|23505999|gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana] gi|332004301|gb|AED91684.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 318 Score = 172 bits (437), Expect = 2e-41 Identities = 87/115 (75%), Positives = 99/115 (86%), Gaps = 4/115 (3%) Frame = +3 Query: 75 EEPQVEISLEKLFIPPETDTG----SLLSTRILKGSNIVLSKYASSAQIEQADFVKSSTT 242 ++ VEI+L+KLFIPPETD + L+TRILKGSNIVLSKYA AQ+ QAD+VKSS Sbjct: 67 DDAPVEIALDKLFIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQADYVKSSVK 126 Query: 243 TEQCPSDGLPEFAFVGRSNVGKSSLVNSIVRRKKLALTSKKPGKTQCINHFRIND 407 TE CP+DGLPEFA VGRSNVGKSSL+NS+VRRK+LALTSKKPGKTQCINHFRIND Sbjct: 127 TEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIND 181 >ref|XP_004163505.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At2g22870-like [Cucumis sativus] Length = 315 Score = 172 bits (436), Expect = 3e-41 Identities = 86/111 (77%), Positives = 93/111 (83%) Frame = +3 Query: 75 EEPQVEISLEKLFIPPETDTGSLLSTRILKGSNIVLSKYASSAQIEQADFVKSSTTTEQC 254 EE Q+ IS EKLF+PP+TD RILKGSNIVL +YA AQ+ QADFVKSS TE C Sbjct: 69 EETQLPISPEKLFVPPDTDISGGGXARILKGSNIVLGRYARDAQVSQADFVKSSVRTEDC 128 Query: 255 PSDGLPEFAFVGRSNVGKSSLVNSIVRRKKLALTSKKPGKTQCINHFRIND 407 PSDGLPEFA VGRSNVGKSSL+NS+VRRKKLALTSKKPGKTQCINHFRIND Sbjct: 129 PSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRIND 179 >ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] gi|297319353|gb|EFH49775.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] Length = 318 Score = 172 bits (435), Expect = 3e-41 Identities = 87/115 (75%), Positives = 98/115 (85%), Gaps = 4/115 (3%) Frame = +3 Query: 75 EEPQVEISLEKLFIPPETDTG----SLLSTRILKGSNIVLSKYASSAQIEQADFVKSSTT 242 ++ VEISL+KLFIPPETD + L+ RILKGSNIVLSKYA AQ+ QAD+VKSS Sbjct: 67 DDAPVEISLDKLFIPPETDISGEDSTSLTARILKGSNIVLSKYARDAQVVQADYVKSSVK 126 Query: 243 TEQCPSDGLPEFAFVGRSNVGKSSLVNSIVRRKKLALTSKKPGKTQCINHFRIND 407 TE CP+DGLPEFA VGRSNVGKSSL+NS+VRRK+LALTSKKPGKTQCINHFRIND Sbjct: 127 TEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIND 181 >ref|XP_002516578.1| GTP-binding protein engB, putative [Ricinus communis] gi|223544398|gb|EEF45919.1| GTP-binding protein engB, putative [Ricinus communis] Length = 317 Score = 172 bits (435), Expect = 3e-41 Identities = 86/112 (76%), Positives = 98/112 (87%), Gaps = 4/112 (3%) Frame = +3 Query: 84 QVEISLEKLFIPPETDT----GSLLSTRILKGSNIVLSKYASSAQIEQADFVKSSTTTEQ 251 Q+ +SL+KLF+PPET+ + LSTRILKGSNIVLSKYA AQI QA+FVKSS +TE Sbjct: 69 QLPLSLDKLFVPPETEVLFTDDAALSTRILKGSNIVLSKYARDAQIGQAEFVKSSVSTED 128 Query: 252 CPSDGLPEFAFVGRSNVGKSSLVNSIVRRKKLALTSKKPGKTQCINHFRIND 407 CP+DGLPEFA VGRSNVGKSSL+NS+VRRKKLALTSKKPGKTQCINHFR+ND Sbjct: 129 CPNDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRVND 180