BLASTX nr result

ID: Coptis24_contig00023011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023011
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36365.3| unnamed protein product [Vitis vinifera]              367   e-100
ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   367   e-100
ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|2...   356   2e-96
ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putativ...   350   2e-94
gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [A...   339   3e-91

>emb|CBI36365.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  367 bits (943), Expect = e-100
 Identities = 177/220 (80%), Positives = 204/220 (92%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAARRA++EHC+GKKI  A +++DSKVID   +SPSDF+ASL+GKTIV+AHRKGKN
Sbjct: 4   LPEVEAARRAVEEHCVGKKITKAVIANDSKVIDG--VSPSDFEASLLGKTIVSAHRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           +WLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRS V DT+EWPSKYSKLF++LDDG+E S
Sbjct: 62  MWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL+DPASVPPISELGPDALLEPMTID  ++SLSKKK+AIK LLLDQ+YI
Sbjct: 122 FTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSYI 181

Query: 542 AGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINK 661
           AGIGNW+ADEVLY ARIHPLQVASSL +ESC+TL +CI +
Sbjct: 182 AGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQ 221


>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
           vinifera]
          Length = 403

 Score =  367 bits (943), Expect = e-100
 Identities = 177/220 (80%), Positives = 204/220 (92%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAARRA++EHC+GKKI  A +++DSKVID   +SPSDF+ASL+GKTIV+AHRKGKN
Sbjct: 4   LPEVEAARRAVEEHCVGKKITKAVIANDSKVIDG--VSPSDFEASLLGKTIVSAHRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           +WLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRS V DT+EWPSKYSKLF++LDDG+E S
Sbjct: 62  MWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL+DPASVPPISELGPDALLEPMTID  ++SLSKKK+AIK LLLDQ+YI
Sbjct: 122 FTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSYI 181

Query: 542 AGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINK 661
           AGIGNW+ADEVLY ARIHPLQVASSL +ESC+TL +CI +
Sbjct: 182 AGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQ 221


>ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|222835967|gb|EEE74388.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  356 bits (914), Expect = 2e-96
 Identities = 176/220 (80%), Positives = 200/220 (90%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAARRAI+EHC+GKKIK A ++DDSKVID   +SPSDF A+L+GKTIV+A RKGKN
Sbjct: 4   LPEVEAARRAIEEHCIGKKIKKAIIADDSKVIDG--VSPSDFVAALVGKTIVSALRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           LWLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRS VND++EWPSKYSK F+QLDDG+E S
Sbjct: 62  LWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDSDEWPSKYSKFFVQLDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL+DPAS PPISELGPDALLEPMT+D L  SLSKKKVAIK LLLDQ+++
Sbjct: 122 FTDKRRFAKVRLLEDPASKPPISELGPDALLEPMTVDELHGSLSKKKVAIKALLLDQSFV 181

Query: 542 AGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINK 661
           +GIGNWIADEVLYQARIHPLQ+ASSL +ES  TL +CI +
Sbjct: 182 SGIGNWIADEVLYQARIHPLQIASSLSRESSATLHKCIKE 221


>ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis]
           gi|223543305|gb|EEF44837.1| formamidopyrimidine-DNA
           glycosylase, putative [Ricinus communis]
          Length = 403

 Score =  350 bits (897), Expect = 2e-94
 Identities = 169/220 (76%), Positives = 197/220 (89%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAAR+AI+E+CLGKKIK A ++ D+KVID   +SPSDF+A+L+GKT+++AHRKGKN
Sbjct: 4   LPEVEAARKAIEENCLGKKIKKAIIASDAKVIDG--VSPSDFEAALVGKTLISAHRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRS VNDT+EWPSKYSKLF++LDDG+E S
Sbjct: 62  LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKLFVELDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL +P SVPPISELGPDALL+PM +D   +SL KKK+ IK LLLDQ++I
Sbjct: 122 FTDKRRFAKVRLLNNPVSVPPISELGPDALLQPMAVDEFYKSLCKKKMPIKALLLDQSFI 181

Query: 542 AGIGNWIADEVLYQARIHPLQVASSLPKESCQTLLECINK 661
           +GIGNWIADEVLYQARIHP Q ASS  KESC TLL+CI +
Sbjct: 182 SGIGNWIADEVLYQARIHPQQSASSFTKESCATLLKCIKE 221


>gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
           thaliana]
          Length = 390

 Score =  339 bits (869), Expect = 3e-91
 Identities = 166/214 (77%), Positives = 188/214 (87%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAARRAI+E+CLGKKIK   ++DD+KVI    ISPSDFQ S++GKTI++A RKGKN
Sbjct: 4   LPEVEAARRAIEENCLGKKIKRVIIADDNKVIHG--ISPSDFQTSILGKTIISARRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           LWL+LDSPPFPSFQFGMAGAIYIKGVAVTKYKRS V D+EEWPSKYSK F++LDDG+E S
Sbjct: 62  LWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL +P SV PISELGPDALLEPMT+D   +SL+KKK+ IK LLLDQ YI
Sbjct: 122 FTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGYI 181

Query: 542 AGIGNWIADEVLYQARIHPLQVASSLPKESCQTL 643
           +GIGNWIADEVLYQARIHPLQ ASSL KE C+ L
Sbjct: 182 SGIGNWIADEVLYQARIHPLQTASSLSKEQCEAL 215


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