BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023010
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...    52   1e-11
ref|XP_003618278.1| 50S ribosomal protein L3-2 [Medicago truncat...    50   7e-11
ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus ...    50   4e-10
ref|XP_004147630.1| PREDICTED: 50S ribosomal protein L3-2, chlor...    52   1e-09
ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chlor...    48   1e-09

>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis
           vinifera] gi|297736812|emb|CBI26013.3| unnamed protein
           product [Vitis vinifera]
          Length = 307

 Score = 52.0 bits (123), Expect(2) = 1e-11
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = -2

Query: 468 SFSPFPTYVSTPDEETAELEPIVADLGELDPFMAAD 361
           S  PFPTY    DE+   LEPIVADLG++DPFM AD
Sbjct: 272 SILPFPTYFPAEDEDPTVLEPIVADLGDIDPFMVAD 307



 Score = 42.0 bits (97), Expect(2) = 1e-11
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 524 PGAEGNCVFIKDTVYEKPDRSVL 456
           PGAEGN VFIKD VY+KPD S+L
Sbjct: 252 PGAEGNFVFIKDAVYKKPDASIL 274


>ref|XP_003618278.1| 50S ribosomal protein L3-2 [Medicago truncatula]
           gi|355493293|gb|AES74496.1| 50S ribosomal protein L3-2
           [Medicago truncatula]
          Length = 294

 Score = 50.4 bits (119), Expect(2) = 7e-11
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = -2

Query: 468 SFSPFPTYVSTPDEETAELEPIVADLGELDPFMAAD 361
           S  PFPTY    DE+T ++EP++ADLG++DPFM  D
Sbjct: 259 SILPFPTYFVPEDEDTDDMEPLIADLGDVDPFMVVD 294



 Score = 41.2 bits (95), Expect(2) = 7e-11
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -3

Query: 524 PGAEGNCVFIKDTVYEKPDRSVL 456
           PGA GN VFIKD VYEKPD S+L
Sbjct: 239 PGATGNFVFIKDAVYEKPDTSIL 261


>ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus communis]
           gi|223541641|gb|EEF43190.1| 50S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 311

 Score = 49.7 bits (117), Expect(2) = 4e-10
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = -2

Query: 459 PFPTYVSTPDEETAELEPIVADLGELDPFMAAD 361
           PFPTY+   DEET E  P++ADLGE+DPFM AD
Sbjct: 281 PFPTYLRAEDEETTE--PLIADLGEMDPFMVAD 311



 Score = 39.3 bits (90), Expect(2) = 4e-10
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -3

Query: 524 PGAEGNCVFIKDTVYEKPDRSVL 456
           PGAEGN VFIKD VY+KPD S L
Sbjct: 258 PGAEGNFVFIKDAVYKKPDISKL 280


>ref|XP_004147630.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Cucumis
           sativus] gi|449498766|ref|XP_004160627.1| PREDICTED: 50S
           ribosomal protein L3-2, chloroplastic-like [Cucumis
           sativus]
          Length = 328

 Score = 52.4 bits (124), Expect(2) = 1e-09
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -2

Query: 459 PFPTYVSTPDEETAELEPIVADLGELDPFMAAD 361
           PFPTY +T  E+T +LEP+VADLGE+DPFM  D
Sbjct: 296 PFPTYFATDGEDTDKLEPLVADLGEVDPFMTGD 328



 Score = 35.4 bits (80), Expect(2) = 1e-09
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = -3

Query: 524 PGAEGNCVFIKDTVYEKPDRSVL 456
           PGAEGN VFIKD VY+K ++S +
Sbjct: 272 PGAEGNFVFIKDAVYKKLNKSAI 294


>ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
           max]
          Length = 299

 Score = 47.8 bits (112), Expect(2) = 1e-09
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -2

Query: 468 SFSPFPTYVSTPDEETAELEPIVADLGELDPFMAAD 361
           S  PFPTY    DE+T  L+P+VA+LG++DPFM  D
Sbjct: 264 SLLPFPTYFVPEDEDTDNLKPLVAELGDVDPFMVTD 299



 Score = 39.7 bits (91), Expect(2) = 1e-09
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -3

Query: 524 PGAEGNCVFIKDTVYEKPDRSVL 456
           PGA GN VFIKD VYEKPD S+L
Sbjct: 244 PGATGNFVFIKDAVYEKPDISLL 266