BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023003
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273222.2| PREDICTED: protein CUP-SHAPED COTYLEDON 3-li...    70   2e-10
emb|CBI40758.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002510719.1| transcription factor, putative [Ricinus comm...    62   4e-08
ref|XP_002300627.1| NAC domain protein, IPR003441 [Populus trich...    57   2e-06

>ref|XP_002273222.2| PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Vitis vinifera]
          Length = 405

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
 Frame = -2

Query: 383 SSIRLKTLLSHQESTSSGQYK-------ETNFSHIQEVDANLHWMDKME---HQDDPTHP 234
           +SI  K+LLSHQE +   Q         E NFSH Q  DAN+HW+D+M    HQ    +P
Sbjct: 290 TSILFKSLLSHQECSLKEQTTIPKQCKTEANFSHFQLPDANMHWVDRMNSNLHQ----NP 345

Query: 233 LCFEMD--KGG--GFWGSQHLHNTNLRDMFTFISQNRAGFQMMLD 111
           L FEMD   GG  GF  +       + +M T I+ NRAGFQMM+D
Sbjct: 346 LFFEMDYCSGGVLGFTAATATGGETVHEMSTSIAFNRAGFQMMVD 390


>emb|CBI40758.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 45/103 (43%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
 Frame = -2

Query: 383 SSIRLKTLLSHQESTSSGQYK-------ETNFSHIQEVDANLHWMDKME---HQDDPTHP 234
           +SI  K+LLSHQE +   Q         E NFSH Q  DAN+HW+D+M    HQ    +P
Sbjct: 207 TSILFKSLLSHQECSLKEQTTIPKQCKTEANFSHFQLPDANMHWVDRMNSNLHQ----NP 262

Query: 233 LCFEMD--KGGGFWGSQHLHNTNLRDMFTFISQNRAGFQMMLD 111
           L FEMD   GG    +       + +M T I+ NRAGFQMM+D
Sbjct: 263 LFFEMDYCSGGVLGFTAATATETVHEMSTSIAFNRAGFQMMVD 305


>ref|XP_002510719.1| transcription factor, putative [Ricinus communis]
           gi|223551420|gb|EEF52906.1| transcription factor,
           putative [Ricinus communis]
          Length = 402

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/103 (42%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
 Frame = -2

Query: 380 SIRLKTLLSHQESTSSGQYK-------ETNFSHIQEVDANLHW-MDKM----EHQDDPTH 237
           S+  K+LLSHQ+ T   Q         E NFSH Q  +ANL+W MDK+    +HQ    +
Sbjct: 286 SMLFKSLLSHQDCTLKEQSPVLKQCKTEANFSHFQLPEANLNWMMDKIHHHHQHQSPYQY 345

Query: 236 PLCFEMDKGG-GFWGSQHLHNTNLRDMFTFISQNRAGFQMMLD 111
           PL FEMD    G   +    +    +M T I+ NRAGFQMMLD
Sbjct: 346 PLSFEMDCNMLGITAAATDADITAHEMSTSIAFNRAGFQMMLD 388


>ref|XP_002300627.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222842353|gb|EEE79900.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 403

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
 Frame = -2

Query: 389 SPSSIRLKTLLSHQEST----SSGQYK----ETNFSHIQEVDANLHWMDKMEHQDD-PTH 237
           SPS +  K++LS+Q+      SS  YK    E NFSH Q  DA+L  +DK+ H +    +
Sbjct: 286 SPSML-FKSILSYQDCALKEQSSTLYKQCNTEANFSHFQLHDAHLGCVDKIIHPNPYQNN 344

Query: 236 PLCFEMDKGG---GFWGSQHLHNTNLRDMFTFISQNRAGFQMMLD 111
           PL FEMD      GF  S    +T   DM T I+ +RAG QMMLD
Sbjct: 345 PLFFEMDCSSNILGFSESASAADTIAHDMSTSIAFSRAGLQMMLD 389