BLASTX nr result

ID: Coptis24_contig00023000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023000
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5...   367   2e-99
ref|XP_002309921.1| white-brown-complex ABC transporter family [...   346   2e-93
ref|XP_002306254.1| white-brown-complex ABC transporter family [...   341   7e-92
emb|CAO94661.1| ATP Binding Cassette Transporter (CrWBC1) [Catha...   340   2e-91
ref|NP_178984.1| ABC transporter G family member 5 [Arabidopsis ...   336   2e-90

>ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5 isoform 1 [Vitis
            vinifera]
          Length = 635

 Score =  367 bits (941), Expect = 2e-99
 Identities = 177/222 (79%), Positives = 188/222 (84%)
 Frame = +2

Query: 2    ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANGXXXXXXXXXX 181
            ERVGLFAFILTFLLSCTTEALPIFLQER+ILMKETSSGSYR+SSY IANG          
Sbjct: 407  ERVGLFAFILTFLLSCTTEALPIFLQERDILMKETSSGSYRVSSYAIANGLVYLPFLLIL 466

Query: 182  XXXXXXXXXXXXGLNPNFMAFMFFVLLIWLIFYTANSVVVCFSALVPNFIIGNSLISGVM 361
                        GLNPNFMAFM F+ LIWLI YTANSVVVCFSALVPNFI+G S+ISGVM
Sbjct: 467  AILFSLPLYLLVGLNPNFMAFMHFLFLIWLILYTANSVVVCFSALVPNFIVGYSVISGVM 526

Query: 362  GSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFEGFLINEFSGAGKCFDYMFGACIVTGE 541
            GSFFLFSGYFISKNGMP YW+FMHYISLFKYPFEGFLINEFSG GKC DYMFG C+V GE
Sbjct: 527  GSFFLFSGYFISKNGMPDYWIFMHYISLFKYPFEGFLINEFSGPGKCLDYMFGTCVVKGE 586

Query: 542  DVLKEAGFGEESRWRNVVIMVCFILFYRFISYVVLRCRCSQK 667
            DVL+E G+GEESRWRNVVIMVCFIL YRFISYV+LRCRCSQ+
Sbjct: 587  DVLREEGYGEESRWRNVVIMVCFILLYRFISYVILRCRCSQR 628


>ref|XP_002309921.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222852824|gb|EEE90371.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 546

 Score =  346 bits (888), Expect = 2e-93
 Identities = 167/218 (76%), Positives = 183/218 (83%)
 Frame = +2

Query: 2   ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANGXXXXXXXXXX 181
           ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETS GSYR+SSY IANG          
Sbjct: 329 ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLIL 388

Query: 182 XXXXXXXXXXXXGLNPNFMAFMFFVLLIWLIFYTANSVVVCFSALVPNFIIGNSLISGVM 361
                       GLNPNFMAFM F+LLIWLI YTANSVVVCFSALVPNFI+GNS+ISGVM
Sbjct: 389 AILFTIPLYWLVGLNPNFMAFMHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVM 448

Query: 362 GSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFEGFLINEFSGAGKCFDYMFGACIVTGE 541
           GSFFLFSGYFISK+GMP YW+FMHYISLFKYPFEGFLINEFS +GKC +YMFG C+V+ E
Sbjct: 449 GSFFLFSGYFISKHGMPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGKCMVSAE 508

Query: 542 DVLKEAGFGEESRWRNVVIMVCFILFYRFISYVVLRCR 655
           D+L+E G+GE+ +WRNVVIMVCFIL YRFISYV+LR R
Sbjct: 509 DLLREEGYGEDGKWRNVVIMVCFILVYRFISYVILRLR 546


>ref|XP_002306254.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222855703|gb|EEE93250.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 643

 Score =  341 bits (875), Expect = 7e-92
 Identities = 164/219 (74%), Positives = 181/219 (82%)
 Frame = +2

Query: 2    ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANGXXXXXXXXXX 181
            ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETS GSYR+SSY IANG          
Sbjct: 413  ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLIL 472

Query: 182  XXXXXXXXXXXXGLNPNFMAFMFFVLLIWLIFYTANSVVVCFSALVPNFIIGNSLISGVM 361
                        GLNPNF+AFM F+LLIWLI YTANSVVVCFSALVPNFI+GNS+ISGVM
Sbjct: 473  AILFTIPLYWLVGLNPNFIAFMHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVM 532

Query: 362  GSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFEGFLINEFSGAGKCFDYMFGACIVTGE 541
            GSFFLFSGYF SK+G+P YW+FMHYISLFKYPFEGFLINEFS +GKC +YMFG C+V  E
Sbjct: 533  GSFFLFSGYFTSKHGIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGKCMVNAE 592

Query: 542  DVLKEAGFGEESRWRNVVIMVCFILFYRFISYVVLRCRC 658
            D+L+E G+ E+ +WRNVVIMVCFIL YRFISYV+LR RC
Sbjct: 593  DLLREEGYREDEKWRNVVIMVCFILLYRFISYVILRFRC 631


>emb|CAO94661.1| ATP Binding Cassette Transporter (CrWBC1) [Catharanthus roseus]
          Length = 626

 Score =  340 bits (871), Expect = 2e-91
 Identities = 168/223 (75%), Positives = 184/223 (82%)
 Frame = +2

Query: 2    ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANGXXXXXXXXXX 181
            ERVGLFAFILTFLLS TTEALPIFLQEREILMKETS GSYR+SSY IANG          
Sbjct: 398  ERVGLFAFILTFLLSSTTEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLIL 457

Query: 182  XXXXXXXXXXXXGLNPNFMAFMFFVLLIWLIFYTANSVVVCFSALVPNFIIGNSLISGVM 361
                        GLN NF AFM F++LIWLI YTANSVVVCFSALVPNFI+GNSLISGVM
Sbjct: 458  ALLFSTPLYWLAGLNRNFFAFMQFLVLIWLILYTANSVVVCFSALVPNFIVGNSLISGVM 517

Query: 362  GSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFEGFLINEFSGAGKCFDYMFGACIVTGE 541
            GSFFLFSGYFISK+G+P YW+FMHYISLFKYPFEGFLINEFSG G C + MFG C+V GE
Sbjct: 518  GSFFLFSGYFISKHGIPGYWMFMHYISLFKYPFEGFLINEFSGYG-CLEIMFGTCVVKGE 576

Query: 542  DVLKEAGFGEESRWRNVVIMVCFILFYRFISYVVLRCRCSQKG 670
            DVLKE G+GEESRWRN++IMVC+IL YRFISYV+LR +CSQ+G
Sbjct: 577  DVLKEVGYGEESRWRNLIIMVCYILVYRFISYVILRYKCSQRG 619


>ref|NP_178984.1| ABC transporter G family member 5 [Arabidopsis thaliana]
            gi|75337284|sp|Q9SIT6.1|AB5G_ARATH RecName: Full=ABC
            transporter G family member 5; Short=ABC transporter
            ABCG.5; Short=AtABCG5; AltName: Full=White-brown complex
            homolog protein 5; Short=AtWBC5 gi|4558665|gb|AAD22683.1|
            putative ABC transporter [Arabidopsis thaliana]
            gi|14532696|gb|AAK64149.1| putative ABC transporter
            protein [Arabidopsis thaliana] gi|22136942|gb|AAM91815.1|
            putative ABC transporter protein [Arabidopsis thaliana]
            gi|330251151|gb|AEC06245.1| ABC transporter G family
            member 5 [Arabidopsis thaliana]
          Length = 649

 Score =  336 bits (862), Expect = 2e-90
 Identities = 163/222 (73%), Positives = 182/222 (81%)
 Frame = +2

Query: 2    ERVGLFAFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANGXXXXXXXXXX 181
            ERVGLFAFILTFLL+ T EALPIFLQEREILMKETSSGSYR+SSY +ANG          
Sbjct: 421  ERVGLFAFILTFLLTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYLPFLLIL 480

Query: 182  XXXXXXXXXXXXGLNPNFMAFMFFVLLIWLIFYTANSVVVCFSALVPNFIIGNSLISGVM 361
                        GLNP+FMAF+ F LLIWLI YTANSVVVCFSALVPNFI+GNS+ISGVM
Sbjct: 481  AILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVM 540

Query: 362  GSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFEGFLINEFSGAGKCFDYMFGACIVTGE 541
            GSFFLFSGYFIS + +P YW+FMHYISLFKYPFEGFLINEFS + KC +Y FG C+VT E
Sbjct: 541  GSFFLFSGYFISNHEIPGYWIFMHYISLFKYPFEGFLINEFSKSNKCLEYGFGKCLVTEE 600

Query: 542  DVLKEAGFGEESRWRNVVIMVCFILFYRFISYVVLRCRCSQK 667
            D+LKE  +GEESRWRNVVIM+CF+L YRFISYV+LRCRCSQ+
Sbjct: 601  DLLKEERYGEESRWRNVVIMLCFVLLYRFISYVILRCRCSQR 642


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