BLASTX nr result
ID: Coptis24_contig00022995
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022995 (536 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max] 185 3e-45 ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max] 185 4e-45 ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2... 180 1e-43 ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max] 174 1e-41 ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|3555146... 171 5e-41 >ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max] Length = 339 Score = 185 bits (470), Expect = 3e-45 Identities = 88/132 (66%), Positives = 109/132 (82%) Frame = +1 Query: 1 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 180 +TI RMELLVLG LDWRLRS+TPF+F+DFFA K+DS+GT GFL+SRAT+II+ I+E S Sbjct: 162 KTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEAS 221 Query: 181 FLDYSPSSIAVASLLHAANEFPNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 360 FL Y PS IA AS+LHAANE PN SF+ P +A +WC GL K++++ CYQLMQE+V+ + Sbjct: 222 FLAYWPSCIAAASILHAANEIPNWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNR 281 Query: 361 RKPPKVLPQLRV 396 RKPPKVLPQLRV Sbjct: 282 RKPPKVLPQLRV 293 >ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max] Length = 339 Score = 185 bits (469), Expect = 4e-45 Identities = 89/132 (67%), Positives = 108/132 (81%) Frame = +1 Query: 1 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 180 +TI RMELLVLG LDWRLRS+TPF+F+DFFA K+DSTGT GFL+SRAT+II+ I+E S Sbjct: 161 KTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEAS 220 Query: 181 FLDYSPSSIAVASLLHAANEFPNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 360 FL Y PS IA A++LHAANE PN S + P +A +WC GL K++I+ CYQLMQE+V+ Q Sbjct: 221 FLAYWPSCIAAAAILHAANEIPNWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQ 280 Query: 361 RKPPKVLPQLRV 396 RKPPKVLPQLRV Sbjct: 281 RKPPKVLPQLRV 292 >ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|296086502|emb|CBI32091.3| unnamed protein product [Vitis vinifera] Length = 324 Score = 180 bits (456), Expect = 1e-43 Identities = 86/132 (65%), Positives = 108/132 (81%) Frame = +1 Query: 1 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 180 +TI RMELLVLG LDWRLRSITPF+F+ FFAYK+DS+G+ IGFL+SRAT+II+ I+E S Sbjct: 154 KTIRRMELLVLGVLDWRLRSITPFSFIGFFAYKLDSSGSVIGFLISRATQIILSNIQEAS 213 Query: 181 FLDYSPSSIAVASLLHAANEFPNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 360 FL+Y PS IA A++L AANE P LS + P A +WC GL K++I++CYQLMQE+ V + Sbjct: 214 FLEYWPSCIAAAAILCAANEIPKLSLVDPERAESWCDGLSKEKIISCYQLMQEITVDNNR 273 Query: 361 RKPPKVLPQLRV 396 RKPPK+LPQLRV Sbjct: 274 RKPPKLLPQLRV 285 >ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max] Length = 348 Score = 174 bits (440), Expect = 1e-41 Identities = 90/135 (66%), Positives = 104/135 (77%), Gaps = 1/135 (0%) Frame = +1 Query: 1 RTICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEIS 180 RTI RMELLVLG LDWRLRS+TP F+ FFA KVDSTGT I FL+SRATEIIV I+E S Sbjct: 172 RTIRRMELLVLGVLDWRLRSVTPLCFLAFFACKVDSTGTFIRFLISRATEIIVSNIQEAS 231 Query: 181 FLDYSPSSIAVASLLHAANEFPNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQ 360 FL Y PS IA A++L AANE PN S + P NA +WC GL K++++ CYQLMQE+V+ Q Sbjct: 232 FLAYWPSCIAAAAILTAANEIPNWSVVKPENAESWCEGLRKEKVIGCYQLMQELVINNNQ 291 Query: 361 RK-PPKVLPQLRVMT 402 RK P KVLPQLRV T Sbjct: 292 RKLPTKVLPQLRVTT 306 >ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|355514665|gb|AES96288.1| Cyclin-D1-1 [Medicago truncatula] Length = 334 Score = 171 bits (434), Expect = 5e-41 Identities = 83/131 (63%), Positives = 103/131 (78%) Frame = +1 Query: 4 TICRMELLVLGTLDWRLRSITPFTFMDFFAYKVDSTGTRIGFLVSRATEIIVKTIKEISF 183 TI RMELLVL LDWRLRS+TPF+F+ FFA K+DST T GFL+SRAT+II+ I+E S Sbjct: 160 TIRRMELLVLSVLDWRLRSVTPFSFLSFFACKLDSTSTFTGFLISRATQIILSKIQEASI 219 Query: 184 LDYSPSSIAVASLLHAANEFPNLSFITPGNAVTWCPGLIKDRIMTCYQLMQEVVVGQTQR 363 L Y PS IA A++L+AANE PN S + P +A +WC GL K++I+ CYQLMQE+V+ QR Sbjct: 220 LAYWPSCIAAAAILYAANEIPNWSLVEPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQR 279 Query: 364 KPPKVLPQLRV 396 KPPKVLPQ+RV Sbjct: 280 KPPKVLPQMRV 290