BLASTX nr result
ID: Coptis24_contig00022989
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00022989
(566 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2... 136 5e-41
ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819... 121 2e-34
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc... 119 3e-34
ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784... 119 3e-34
ref|XP_003619431.1| HAT family dimerization domain containing pr... 117 2e-31
>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
predicted protein [Populus trichocarpa]
Length = 788
Score = 136 bits (343), Expect(2) = 5e-41
Identities = 69/131 (52%), Positives = 93/131 (70%)
Frame = -3
Query: 561 ELNDRFNEANTELLLCMACLDPSESFVAFDKQKLIRFARLYPDDFSEIDQMELADQLENY 382
EL+DRF E +TELLLC+ACL+PS+SF AF+K+KL+R A YP +FS +D M L DQL+ Y
Sbjct: 619 ELDDRFTETSTELLLCVACLNPSDSFSAFNKEKLLRLALFYPSEFSIVDLMILGDQLDTY 678
Query: 381 IIDVRSDTKFGEVNGISGLAKKMVETKKDIVXXXXXXXXXXXXXXXXATATVERAFFAMN 202
IID+R D +F ++ GI+ LA+KMV+TKK+++ ATATVER F AM+
Sbjct: 679 IIDLRGDDEFSDIEGIASLAEKMVKTKKNLIFPLVYMLIKLSLLLPVATATVERVFSAMH 738
Query: 201 IIKNCLCNRDG 169
I+K+ L NR G
Sbjct: 739 IVKSRLRNRMG 749
Score = 56.6 bits (135), Expect(2) = 5e-41
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = -1
Query: 173 MADEWLNDYLIIYIEKEVFDSIDSELILQRFQKIKKDDKKESRREQL 33
M D+W+ND L++YIEK++FD ID+E I++RFQ +K +RREQL
Sbjct: 748 MGDKWMNDSLVVYIEKDIFDKIDNEAIMKRFQNMK------TRREQL 788
>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
Length = 557
Score = 121 bits (303), Expect(2) = 2e-34
Identities = 65/132 (49%), Positives = 85/132 (64%)
Frame = -3
Query: 564 QELNDRFNEANTELLLCMACLDPSESFVAFDKQKLIRFARLYPDDFSEIDQMELADQLEN 385
+ELNDRF E NT LL CM CL+P+ F AFDK +LI FA+ YP +FS I+ + L +QLE
Sbjct: 387 EELNDRFTETNTRLLFCMDCLNPTNLFSAFDKARLIEFAKFYPCEFSAINLVMLDNQLET 446
Query: 384 YIIDVRSDTKFGEVNGISGLAKKMVETKKDIVXXXXXXXXXXXXXXXXATATVERAFFAM 205
YIID+RS+ + + GI L++K+VET + IV AT+T+ERAF AM
Sbjct: 447 YIIDMRSNVELSFLKGIKNLSEKLVETGRHIVYPLVYLLLKLAMILPVATSTMERAFSAM 506
Query: 204 NIIKNCLCNRDG 169
I+KN L NR G
Sbjct: 507 KIVKNRLRNRLG 518
Score = 50.1 bits (118), Expect(2) = 2e-34
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -1
Query: 173 MADEWLNDYLIIYIEKEVFDSIDSELILQRFQKIKKDDKKESRREQL 33
+ D W+ND L+ YIEK++F+ ID+E I+QRFQ +K SRR QL
Sbjct: 517 LGDAWMNDCLVTYIEKDMFNKIDNERIIQRFQNMK------SRRGQL 557
>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
[Medicago truncatula]
Length = 892
Score = 119 bits (297), Expect(2) = 3e-34
Identities = 66/132 (50%), Positives = 80/132 (60%)
Frame = -3
Query: 564 QELNDRFNEANTELLLCMACLDPSESFVAFDKQKLIRFARLYPDDFSEIDQMELADQLEN 385
QELN+RFNE N+ LL+CM CL P+ SF FDK KLI FA+ YP +FS + L QLE
Sbjct: 722 QELNNRFNETNSRLLICMECLCPNNSFSKFDKAKLIEFAKFYPIEFSPTSLVLLDSQLET 781
Query: 384 YIIDVRSDTKFGEVNGISGLAKKMVETKKDIVXXXXXXXXXXXXXXXXATATVERAFFAM 205
YI D+R +F + GIS L+KKMV KK I AT+TVERAF AM
Sbjct: 782 YIFDMRRSVEFASLKGISDLSKKMVALKKHIDYPLVYGLLKLAMILPVATSTVERAFSAM 841
Query: 204 NIIKNCLCNRDG 169
I+K+ L NR G
Sbjct: 842 KIVKSRLRNRMG 853
Score = 51.6 bits (122), Expect(2) = 3e-34
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = -1
Query: 173 MADEWLNDYLIIYIEKEVFDSIDSELILQRFQKI 72
M D+W+ND L+ YIE++V D ID ELI+QRFQK+
Sbjct: 852 MGDDWMNDCLVTYIERDVADKIDDELIIQRFQKM 885
>ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784329 [Glycine max]
Length = 428
Score = 119 bits (297), Expect(2) = 3e-34
Identities = 62/131 (47%), Positives = 83/131 (63%)
Frame = -3
Query: 561 ELNDRFNEANTELLLCMACLDPSESFVAFDKQKLIRFARLYPDDFSEIDQMELADQLENY 382
ELND F E NT+LLLCM CL+P+ F FD +LI FA+ YP +FS I+ + L +QLE Y
Sbjct: 259 ELNDHFTETNTQLLLCMDCLNPTNLFSTFDNARLIEFAKFYPCEFSAINLVMLNNQLETY 318
Query: 381 IIDVRSDTKFGEVNGISGLAKKMVETKKDIVXXXXXXXXXXXXXXXXATATVERAFFAMN 202
IID+R++ +F + GI + +K+VET++ IV AT T+ERAF AM
Sbjct: 319 IIDMRNNIEFSSLKGIKNIYEKLVETRRHIVYPLVYLLLKLAMILPVATTTMERAFSAMK 378
Query: 201 IIKNCLCNRDG 169
I+KN L NR G
Sbjct: 379 IVKNRLRNRMG 389
Score = 51.6 bits (122), Expect(2) = 3e-34
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -1
Query: 173 MADEWLNDYLIIYIEKEVFDSIDSELILQRFQKIK 69
M D W+ND L+ YIEK+VF+ ID+ELI+Q+FQ +K
Sbjct: 388 MGDAWMNDCLVTYIEKDVFNKIDNELIIQQFQNMK 422
>ref|XP_003619431.1| HAT family dimerization domain containing protein [Medicago
truncatula] gi|355494446|gb|AES75649.1| HAT family
dimerization domain containing protein [Medicago
truncatula]
Length = 969
Score = 117 bits (293), Expect(2) = 2e-31
Identities = 62/132 (46%), Positives = 84/132 (63%)
Frame = -3
Query: 564 QELNDRFNEANTELLLCMACLDPSESFVAFDKQKLIRFARLYPDDFSEIDQMELADQLEN 385
QELN RF+E NTELL C++CL P++SF AFD KL+R A LYP+DF ++ ++EL QL N
Sbjct: 620 QELNARFDEENTELLQCVSCLSPAKSFSAFDVNKLLRMAELYPNDFVDVSEVELRRQLHN 679
Query: 384 YIIDVRSDTKFGEVNGISGLAKKMVETKKDIVXXXXXXXXXXXXXXXXATATVERAFFAM 205
Y+ +V+SD KF ++ G+S L +VET K ATA+VER F AM
Sbjct: 680 YVRNVKSDPKFAKLKGLSDLCAILVETNKCKTFALVFKLLKLALLLPVATASVERVFSAM 739
Query: 204 NIIKNCLCNRDG 169
I+K+ L N+ G
Sbjct: 740 KIVKSHLRNKMG 751
Score = 43.9 bits (102), Expect(2) = 2e-31
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = -1
Query: 173 MADEWLNDYLIIYIEKEVFDSIDSELILQRFQKIKKDDKKESRRE 39
M D+WLND L+ +IE++V +I +++IL FQ++ DD++ S RE
Sbjct: 750 MGDQWLNDRLVTFIERDVLFTISTDVILAHFQQM--DDRRFSLRE 792