BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022984
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...   165   3e-39
ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_002322006.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]   107   3e-23
ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medica...    71   1e-10

>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/91 (91%), Positives = 84/91 (92%)
 Frame = +2

Query: 23  RPARLEWAQRSAPIRITLGGLSLLPNLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTD 202
           RPAR EWA RSAPIRITLGGLSLLP+LERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTD
Sbjct: 172 RPARPEWAPRSAPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTD 231

Query: 203 VSIISDHEDPGRASSFHSHHHIDDKSPRALP 295
             II DHEDPGRAS FHS HHIDDKSPRALP
Sbjct: 232 GLIILDHEDPGRASGFHS-HHIDDKSPRALP 261


>ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|222869001|gb|EEF06132.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/91 (85%), Positives = 80/91 (87%)
 Frame = +2

Query: 23  RPARLEWAQRSAPIRITLGGLSLLPNLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTD 202
           R AR EWAQRSAPIRITLGGLSLLP+LERYYESSV DSIAAA+WFT TTKKSHAYVTV D
Sbjct: 13  RHARPEWAQRSAPIRITLGGLSLLPDLERYYESSVSDSIAAAVWFTSTTKKSHAYVTVID 72

Query: 203 VSIISDHEDPGRASSFHSHHHIDDKSPRALP 295
             II DHEDPGRAS FHSHHHID KSPRA P
Sbjct: 73  GLIILDHEDPGRASGFHSHHHIDGKSPRAPP 103


>ref|XP_002322006.1| predicted protein [Populus trichocarpa] gi|222869002|gb|EEF06133.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/82 (85%), Positives = 73/82 (89%)
 Frame = +2

Query: 23  RPARLEWAQRSAPIRITLGGLSLLPNLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVTD 202
           R AR EWAQRSAPIRI LGGLSLLP+L+RYYESSVPDSIAAAIWFTGTTKKSHAYVTV D
Sbjct: 13  RHARPEWAQRSAPIRIILGGLSLLPDLKRYYESSVPDSIAAAIWFTGTTKKSHAYVTVID 72

Query: 203 VSIISDHEDPGRASSFHSHHHI 268
             II DHEDPG AS FHSHHH+
Sbjct: 73  GLIILDHEDPG-ASGFHSHHHM 93


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score =  107 bits (266), Expect(2) = 3e-23
 Identities = 60/83 (72%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
 Frame = +2

Query: 2   SSSHPRGRPARLEWAQRSA--PIRITLGGLSLLPNLERYYESSVPDSIAAAIWFTGTTKK 175
           SSS P+G   R E    SA  P    + GLSLLP+LERYYESSVPDSIAAAIWFTGTTKK
Sbjct: 161 SSSQPQGPALRCEARVGSAVSPHSNYVRGLSLLPDLERYYESSVPDSIAAAIWFTGTTKK 220

Query: 176 SHAYVTVTDVSIISDHEDPGRAS 244
           SHAYVTVTD  II DHED GRAS
Sbjct: 221 SHAYVTVTDGFIILDHEDAGRAS 243



 Score = 26.2 bits (56), Expect(2) = 3e-23
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 357 TDRTRSSYWLV 389
           +DRTRSSYWLV
Sbjct: 243 SDRTRSSYWLV 253


>ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477313|gb|AES58516.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 346

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = -2

Query: 301 FLWQSTRRFIINMMMGMETRSTTGVFVVRDNTYISNS-NVSMRLFGSTGEPDGRGDGIWD 125
           F  Q ++R++   M+   +        V+DN  ISNS NVSMRLFGSTGEPDGRGDGIWD
Sbjct: 280 FFEQESQRYLTFTMIRTPSSYEARPTGVQDNQTISNSSNVSMRLFGSTGEPDGRGDGIWD 339

Query: 124 GRLVVSL 104
           G LVVSL
Sbjct: 340 GGLVVSL 346



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -3

Query: 387 RANNSNAFGLFFEQESQLYLTFTMIRTPSSY 295
           RANNSNAFGLFFEQESQ YLTFTMIRTPSSY
Sbjct: 270 RANNSNAFGLFFEQESQRYLTFTMIRTPSSY 300