BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022977
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi...   323   2e-86
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,...   312   4e-83
ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|2...   295   5e-78
ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi...   295   8e-78
ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containi...   295   8e-78

>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
            [Vitis vinifera]
          Length = 798

 Score =  323 bits (829), Expect = 2e-86
 Identities = 158/234 (67%), Positives = 193/234 (82%)
 Frame = -3

Query: 710  SLKLEISKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGL 531
            SL+LEISK++ FP + TYTILICG+C  GL  EA+QIF +ME   C P++MTFNALI GL
Sbjct: 397  SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 530  CKVRKLEEAQILFFKMEIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKV 351
            CK  +LEEA+ LF+KMEIGKNPSLFLRLSQGADRV+D+ASLQTMVERLC+SG ILKAYK+
Sbjct: 457  CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 350  LKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQR 171
            L QLA+SGVVP+I TYN+L+NGFCK+ +IN AFKLF++LQLKG+SPD++TYGTL+DG  R
Sbjct: 517  LMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHR 576

Query: 170  VNREVDALHVFHQMERNSVSPNLAVYTILMKCYCRKRKWILAFSLWMKYMRGLP 9
            V+RE DA  V  QM +N  +P+ AVY  LM   CRK K  +AFSLW+KY+R LP
Sbjct: 577  VDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLP 630



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 22/225 (9%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           P+ AT+ IL+ GLC  G   +A ++F+EM +K   P  M +  ++ GLC+ ++ ++   L
Sbjct: 199 PNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRL 258

Query: 494 FFKMEI--------------------GKNPSLF--LRLSQGADRVLDSASLQTMVERLCD 381
              M++                    G+    F  L+L +    VL      ++++ L  
Sbjct: 259 LNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFR 318

Query: 380 SGEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAIT 201
           +    +  +  +++  +G+ P++  Y IL+ GFC+ G ++ A  +  D+  +G SPD   
Sbjct: 319 AKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYC 378

Query: 200 YGTLMDGLQRVNREVDALHVFHQMERNSVSPNLAVYTILMKCYCR 66
           Y  L+ G   V     A  +  ++ +N   P    YTIL+   CR
Sbjct: 379 YNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCR 423



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           PD  TY  ++  +  + +   A  ++ +M K    P   TF  L+ GLCK  K ++A  +
Sbjct: 164 PDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKM 223

Query: 494 FFKME---IGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLANSGV 324
           F +M    I  N  ++  +  G                LC +      +++L  +  SG 
Sbjct: 224 FDEMTQKGIPPNTMIYTIILSG----------------LCQAKRTDDVHRLLNTMKVSGC 267

Query: 323 VPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALH 144
            P+  T N L++GFCK G I+ AF L +  + +GY      Y +L+DGL R  R  +   
Sbjct: 268 CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQE 327

Query: 143 VFHQMERNSVSPNLAVYTILMKCYC 69
              +M +  + P++ +YTIL++ +C
Sbjct: 328 WCRKMFKAGIEPDVVLYTILIRGFC 352



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 57/240 (23%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           P+   YTI++ GLC      +  ++   M+   C P  +T NAL+ G CK+ +++EA  L
Sbjct: 234 PNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFAL 293

Query: 494 F--------------------------------------FKMEIGKNPSLFLRLSQG--- 438
                                                  FK  I  +  L+  L +G   
Sbjct: 294 LQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCE 353

Query: 437 ---ADRVL-------------DSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIFT 306
               D  L             D+     +++  CD G + KA  +  +++ +   P   T
Sbjct: 354 VGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCT 413

Query: 305 YNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQME 126
           Y IL+ G C++G ++ A ++F  ++  G SP  +T+  L+DGL +     +A H+F++ME
Sbjct: 414 YTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKME 473



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 1/220 (0%)
 Frame = -3

Query: 692 SKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKL 513
           ++  SF    T+ ++I  L          +I EE++         TF+ LI    K    
Sbjct: 88  TRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMA 147

Query: 512 EEAQILFFKM-EIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLA 336
           E+A   F KM + G  P +F            ++ L  MV++       L A  V  Q+ 
Sbjct: 148 EKAVESFGKMKDFGCKPDVFTY----------NSILHVMVQKEV----FLLALAVYNQML 193

Query: 335 NSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREV 156
                PN  T+ IL+NG CK+G  + A K+F ++  KG  P+ + Y  ++ GL +  R  
Sbjct: 194 KLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTD 253

Query: 155 DALHVFHQMERNSVSPNLAVYTILMKCYCRKRKWILAFSL 36
           D   + + M+ +   P+      L+  +C+  +   AF+L
Sbjct: 254 DVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFAL 293


>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 804

 Score =  312 bits (800), Expect = 4e-83
 Identities = 152/234 (64%), Positives = 185/234 (79%)
 Frame = -3

Query: 710  SLKLEISKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGL 531
            SL LEISK++ F  A TYTILICG+C  GL G+AQQIF EMEK  C+P+V+TFNALI G 
Sbjct: 392  SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451

Query: 530  CKVRKLEEAQILFFKMEIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKV 351
            CK   +E+AQ+LF+KMEIG+NPSLFLRLSQGA+RVLD+ASLQTMVE+LCDSG ILKAY +
Sbjct: 452  CKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNI 511

Query: 350  LKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQR 171
            L QL +SG  PNI TYNIL++GFCK+G+IN AFKLFK+LQLKG SPD++TYGTL++GL  
Sbjct: 512  LMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLS 571

Query: 170  VNREVDALHVFHQMERNSVSPNLAVYTILMKCYCRKRKWILAFSLWMKYMRGLP 9
             NRE DA  V  Q+ +N  +P   VY   M   CR+ K  LAFSLW+KY+R +P
Sbjct: 572  ANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIP 625



 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           PD  TY  ++  +  + +   A  I+  M K  C P + TF+ LI G+CK  K + A  +
Sbjct: 159 PDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQM 218

Query: 494 FFKMEIGKNPSLFLRLSQGADRVLDSASLQTMV-ERLCDSGEILKAYKVLKQLANSGVVP 318
           F +M                 R+L +    T++   LC + +   AY++   + + G +P
Sbjct: 219 FDEMT--------------QRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIP 264

Query: 317 NIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVF 138
           +  TYN L++GFCK G ++ A  L K  +   Y  D   Y  L+DGL R  R  DA   +
Sbjct: 265 DSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWY 324

Query: 137 HQMERNSVSPNLAVYTILMK 78
            +M  +++ P++ +YTI+MK
Sbjct: 325 RKMTEHNIKPDVILYTIMMK 344



 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 22/233 (9%)
 Frame = -3

Query: 698 EISKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVR 519
           E+++    P+  TYTI+I GLC       A ++F  M+   C P  +T+NAL+ G CK+ 
Sbjct: 221 EMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLG 280

Query: 518 KLEEAQILF----------------------FKMEIGKNPSLFLRLSQGADRVLDSASLQ 405
           +++EA  L                       F+    ++  ++ R     +   D     
Sbjct: 281 RVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYT 340

Query: 404 TMVERLCDSGEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLK 225
            M++ L  +G+   A ++L ++   G+VP+   YN L+ G+C  G ++ A  L  ++   
Sbjct: 341 IMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKN 400

Query: 224 GYSPDAITYGTLMDGLQRVNREVDALHVFHQMERNSVSPNLAVYTILMKCYCR 66
                A TY  L+ G+ R     DA  +F++ME++   P++  +  L+  +C+
Sbjct: 401 DCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCK 453



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 50/216 (23%), Positives = 107/216 (49%)
 Frame = -3

Query: 668 AATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQILFF 489
           A  +T+LI       +  +A + FE M+   C P V T+N ++  + +   +  A  ++ 
Sbjct: 126 ADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYN 185

Query: 488 KMEIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIF 309
           +M         L+L+     + + A+   +++ +C SG+   A ++  ++    ++PN  
Sbjct: 186 RM---------LKLNC----LPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKI 232

Query: 308 TYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQM 129
           TY I+++G C++   + A++LF  ++  G  PD++TY  L+ G  ++ R  +AL +    
Sbjct: 233 TYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYF 292

Query: 128 ERNSVSPNLAVYTILMKCYCRKRKWILAFSLWMKYM 21
           E++    +   Y+ L+    R R++  A  +W + M
Sbjct: 293 EKDRYVLDKQGYSCLIDGLFRARRFEDA-QVWYRKM 327


>ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|222854000|gb|EEE91547.1|
            predicted protein [Populus trichocarpa]
          Length = 789

 Score =  295 bits (756), Expect = 5e-78
 Identities = 141/233 (60%), Positives = 181/233 (77%)
 Frame = -3

Query: 710  SLKLEISKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGL 531
            SL+LEIS+H+ FP+  TY+ILI G+C  GL  +AQ+IF EMEK  C+P+ +TFN+LI GL
Sbjct: 392  SLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGL 451

Query: 530  CKVRKLEEAQILFFKMEIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKV 351
            CK  +LE+A +LF+KMEIG+NPSLFLRLSQG   VLDSASLQ MVE+LCDSG I KAY++
Sbjct: 452  CKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRI 511

Query: 350  LKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQR 171
            L QLA+SG  P I+TYNIL+NGFCK G+ N A+KLF+++Q KG SPD +TYGTL++GL R
Sbjct: 512  LMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLR 571

Query: 170  VNREVDALHVFHQMERNSVSPNLAVYTILMKCYCRKRKWILAFSLWMKYMRGL 12
              RE DA  VF QME+N  +P+ AVY  +M   CR+ +   AFSLW+KY+R +
Sbjct: 572  FQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNI 624



 Score =  100 bits (249), Expect = 3e-19
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           PD  TY +++  L  +     A  ++  M K  C P V TF+ LI GLCK   +++A  L
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 494 FFKM-EIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVP 318
           F +M + G  P  F              +   ++  LC S  +  AY++  ++ +SGV P
Sbjct: 219 FDEMTQRGILPDAF--------------TYCVVISGLCRSKRVDDAYRLFDKMKDSGVGP 264

Query: 317 NIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVF 138
           +  T N L+NGFC    ++ AF L +  +  GY  D   Y  L+ GL R  R  D   ++
Sbjct: 265 DFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLY 324

Query: 137 HQMERNSVSPNLAVYTILMK 78
            +M  ++V P++ +YTI+MK
Sbjct: 325 RKMIEDNVKPDVYLYTIMMK 344



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 22/238 (9%)
 Frame = -3

Query: 713 LSLKLEISKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRG 534
           L++   + K    P+ AT++ILI GLC  G   +A  +F+EM ++   P   T+  +I G
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 533 LCKVRKLEEAQILFFKM-EIGKNPSL---------------------FLRLSQGADRVLD 420
           LC+ +++++A  LF KM + G  P                        LRL +    VLD
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 419 SASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFK 240
                 ++  L  +        + +++    V P+++ Y I+M G  ++G +  A +L  
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360

Query: 239 DLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQMERNSVSPNLAVYTILMKCYCR 66
           ++   G  PD + Y  L+ G   +    +A  +  ++ R+   PN+  Y+IL+   CR
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCR 418



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 23/247 (9%)
 Frame = -3

Query: 698 EISKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVR 519
           E+++    PDA TY ++I GLC      +A ++F++M+     P  +T NAL+ G C + 
Sbjct: 221 EMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLD 280

Query: 518 KLEEAQILF----------------------FKMEIGKNPSLFLRLSQGADRVLDSASLQ 405
           +++EA  L                       F+ +  ++  L  R     D V     L 
Sbjct: 281 RVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYR-KMIEDNVKPDVYLY 339

Query: 404 T-MVERLCDSGEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQL 228
           T M++ L ++G++  A ++L ++  SGVVP+   YN+L+ GFC  G ++ A  L  ++  
Sbjct: 340 TIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISR 399

Query: 227 KGYSPDAITYGTLMDGLQRVNREVDALHVFHQMERNSVSPNLAVYTILMKCYCRKRKWIL 48
               P+  TY  L+ G+ R     DA  +F++ME+    P+   +  L+   C+  +   
Sbjct: 400 HDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEK 459

Query: 47  AFSLWMK 27
           A  L+ K
Sbjct: 460 AHLLFYK 466



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 46/203 (22%), Positives = 100/203 (49%), Gaps = 1/203 (0%)
 Frame = -3

Query: 659 YTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQILFFKM- 483
           + +LI      GL  +A + F  M    C P V T+N ++  L +   L  A  ++ +M 
Sbjct: 129 FFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMM 188

Query: 482 EIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIFTY 303
           ++   P++              A+   +++ LC SG +  A  +  ++   G++P+ FTY
Sbjct: 189 KLNCLPNV--------------ATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTY 234

Query: 302 NILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQMER 123
            ++++G C+S  ++ A++LF  ++  G  PD +T   L++G   ++R  +A  +    E+
Sbjct: 235 CVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEK 294

Query: 122 NSVSPNLAVYTILMKCYCRKRKW 54
           +    ++  Y+ L++   R +++
Sbjct: 295 DGYVLDVRGYSCLIRGLFRAKRY 317



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 40/129 (31%), Positives = 68/129 (52%)
 Frame = -3

Query: 422 DSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLF 243
           D  +   +++ L     +L A  V  ++     +PN+ T++IL++G CKSG++  A  LF
Sbjct: 160 DVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLF 219

Query: 242 KDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQMERNSVSPNLAVYTILMKCYCRK 63
            ++  +G  PDA TY  ++ GL R  R  DA  +F +M+ + V P+      L+  +C  
Sbjct: 220 DEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCML 279

Query: 62  RKWILAFSL 36
            +   AFSL
Sbjct: 280 DRVDEAFSL 288


>ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
            [Cucumis sativus]
          Length = 950

 Score =  295 bits (754), Expect = 8e-78
 Identities = 141/231 (61%), Positives = 179/231 (77%)
 Frame = -3

Query: 710  SLKLEISKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGL 531
            SL+LEISKH+ FP+  TY+ILICG+C  GL  +AQ IF+EMEK  C P+V+TFN+LI GL
Sbjct: 394  SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 530  CKVRKLEEAQILFFKMEIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKV 351
            CK  +LEEA++LF++MEI + PSLFLRLSQG D+V D ASLQ M+ERLC+SG ILKAYK+
Sbjct: 454  CKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKL 513

Query: 350  LKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQR 171
            L QL +SGV+P+I TYNIL+NGFCK G+IN AFKLFK++QLKG+ PD++TYGTL+DGL R
Sbjct: 514  LMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYR 573

Query: 170  VNREVDALHVFHQMERNSVSPNLAVYTILMKCYCRKRKWILAFSLWMKYMR 18
              R  DAL +F QM +    P  + Y  +M   CR+    LA S+WMKY+R
Sbjct: 574  AGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLR 624



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 61/201 (30%), Positives = 107/201 (53%), Gaps = 2/201 (0%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           PD   + +++  L  +     A  ++ +M K    P V+T+  LI GLCK  K ++A +L
Sbjct: 161 PDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVL 220

Query: 494 FFKMEIGKNPSLFLRLSQGADR-VLDSASLQTMV-ERLCDSGEILKAYKVLKQLANSGVV 321
           F +M                DR +L +  + ++V   LC + +I  A ++  ++  SG  
Sbjct: 221 FDEM---------------TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCN 265

Query: 320 PNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHV 141
            ++ TYN+L+NGFCKSG ++ AF L + L   G+    I YG L++GL R  R  +A   
Sbjct: 266 RDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMW 325

Query: 140 FHQMERNSVSPNLAVYTILMK 78
           + +M R ++ P++ +YTI+++
Sbjct: 326 YQKMLRENIKPDVMLYTIMIR 346



 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 54/202 (26%), Positives = 96/202 (47%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           PD  TY ILI GLC      +A  +F+EM  +   P  + ++ ++ GLC+ +K+ +AQ L
Sbjct: 196 PDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255

Query: 494 FFKMEIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPN 315
           F KM            + G +R  D  +   ++   C SG +  A+ +L+ L   G +  
Sbjct: 256 FSKMR-----------ASGCNR--DLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILG 302

Query: 314 IFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFH 135
           +  Y  L+NG  ++     A   ++ +  +   PD + Y  ++ GL +  R  +AL +  
Sbjct: 303 VIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLG 362

Query: 134 QMERNSVSPNLAVYTILMKCYC 69
           +M    + P+   Y  L+K +C
Sbjct: 363 EMTERGLRPDTICYNALIKGFC 384



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
 Frame = -3

Query: 671 DAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQILF 492
           D  TY +L+ G C  G   +A  + + + K      V+ +  LI GL + R+ EEA + +
Sbjct: 267 DLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY 326

Query: 491 FKM--------------------EIGKNPSLFLRLSQGADRVL--DSASLQTMVERLCDS 378
            KM                    + G+       L +  +R L  D+     +++  CD 
Sbjct: 327 QKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386

Query: 377 GEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITY 198
           G + +A  +  +++     PN  TY+IL+ G CK+G IN A  +FK+++  G  P  +T+
Sbjct: 387 GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446

Query: 197 GTLMDGLQRVNREVDALHVFHQME 126
            +L++GL + NR  +A  +F+QME
Sbjct: 447 NSLINGLCKANRLEEARLLFYQME 470



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
 Frame = -3

Query: 659 YTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQILFFKM- 483
           +++LI      G++ +A + F  M    C P +  FN ++  L +      A  ++ +M 
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQML 190

Query: 482 EIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIFTY 303
           +   NP              D  +   ++  LC + +   A  +  ++ + G++PN   Y
Sbjct: 191 KCNLNP--------------DVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIY 236

Query: 302 NILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQMER 123
           +I+++G C++  I  A +LF  ++  G + D ITY  L++G  +     DA  +   + +
Sbjct: 237 SIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTK 296

Query: 122 NSVSPNLAVYTILMKCYCRKRKWILAFSLWMKYMR 18
           +     +  Y  L+    R R++  A   + K +R
Sbjct: 297 DGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 31/133 (23%), Positives = 66/133 (49%)
 Frame = -3

Query: 425 LDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKL 246
           + S +   ++E   ++G   KA +    + +    P++F +N++++   +      A  +
Sbjct: 126 ISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAV 185

Query: 245 FKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQMERNSVSPNLAVYTILMKCYCR 66
           +  +     +PD +TYG L+ GL +  +  DAL +F +M    + PN  +Y+I++   C+
Sbjct: 186 YNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQ 245

Query: 65  KRKWILAFSLWMK 27
            +K   A  L+ K
Sbjct: 246 AKKIFDAQRLFSK 258


>ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
            [Cucumis sativus]
          Length = 783

 Score =  295 bits (754), Expect = 8e-78
 Identities = 141/231 (61%), Positives = 179/231 (77%)
 Frame = -3

Query: 710  SLKLEISKHESFPDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGL 531
            SL+LEISKH+ FP+  TY+ILICG+C  GL  +AQ IF+EMEK  C P+V+TFN+LI GL
Sbjct: 394  SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 530  CKVRKLEEAQILFFKMEIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKV 351
            CK  +LEEA++LF++MEI + PSLFLRLSQG D+V D ASLQ M+ERLC+SG ILKAYK+
Sbjct: 454  CKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKL 513

Query: 350  LKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQR 171
            L QL +SGV+P+I TYNIL+NGFCK G+IN AFKLFK++QLKG+ PD++TYGTL+DGL R
Sbjct: 514  LMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYR 573

Query: 170  VNREVDALHVFHQMERNSVSPNLAVYTILMKCYCRKRKWILAFSLWMKYMR 18
              R  DAL +F QM +    P  + Y  +M   CR+    LA S+WMKY+R
Sbjct: 574  AGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLR 624



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 61/201 (30%), Positives = 107/201 (53%), Gaps = 2/201 (0%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           PD   + +++  L  +     A  ++ +M K    P V+T+  LI GLCK  K ++A +L
Sbjct: 161 PDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVL 220

Query: 494 FFKMEIGKNPSLFLRLSQGADR-VLDSASLQTMV-ERLCDSGEILKAYKVLKQLANSGVV 321
           F +M                DR +L +  + ++V   LC + +I  A ++  ++  SG  
Sbjct: 221 FDEM---------------TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCN 265

Query: 320 PNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHV 141
            ++ TYN+L+NGFCKSG ++ AF L + L   G+    I YG L++GL R  R  +A   
Sbjct: 266 RDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMW 325

Query: 140 FHQMERNSVSPNLAVYTILMK 78
           + +M R ++ P++ +YTI+++
Sbjct: 326 YQKMLRENIKPDVMLYTIMIR 346



 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 54/202 (26%), Positives = 96/202 (47%)
 Frame = -3

Query: 674 PDAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQIL 495
           PD  TY ILI GLC      +A  +F+EM  +   P  + ++ ++ GLC+ +K+ +AQ L
Sbjct: 196 PDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255

Query: 494 FFKMEIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPN 315
           F KM            + G +R  D  +   ++   C SG +  A+ +L+ L   G +  
Sbjct: 256 FSKMR-----------ASGCNR--DLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILG 302

Query: 314 IFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFH 135
           +  Y  L+NG  ++     A   ++ +  +   PD + Y  ++ GL +  R  +AL +  
Sbjct: 303 VIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLG 362

Query: 134 QMERNSVSPNLAVYTILMKCYC 69
           +M    + P+   Y  L+K +C
Sbjct: 363 EMTERGLRPDTICYNALIKGFC 384



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
 Frame = -3

Query: 671 DAATYTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQILF 492
           D  TY +L+ G C  G   +A  + + + K      V+ +  LI GL + R+ EEA + +
Sbjct: 267 DLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY 326

Query: 491 FKM--------------------EIGKNPSLFLRLSQGADRVL--DSASLQTMVERLCDS 378
            KM                    + G+       L +  +R L  D+     +++  CD 
Sbjct: 327 QKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386

Query: 377 GEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITY 198
           G + +A  +  +++     PN  TY+IL+ G CK+G IN A  +FK+++  G  P  +T+
Sbjct: 387 GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446

Query: 197 GTLMDGLQRVNREVDALHVFHQME 126
            +L++GL + NR  +A  +F+QME
Sbjct: 447 NSLINGLCKANRLEEARLLFYQME 470



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
 Frame = -3

Query: 659 YTILICGLCNQGLEGEAQQIFEEMEKKKCFPTVMTFNALIRGLCKVRKLEEAQILFFKM- 483
           +++LI      G++ +A + F  M    C P +  FN ++  L +      A  ++ +M 
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQML 190

Query: 482 EIGKNPSLFLRLSQGADRVLDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIFTY 303
           +   NP              D  +   ++  LC + +   A  +  ++ + G++PN   Y
Sbjct: 191 KCNLNP--------------DVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIY 236

Query: 302 NILMNGFCKSGDINSAFKLFKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQMER 123
           +I+++G C++  I  A +LF  ++  G + D ITY  L++G  +     DA  +   + +
Sbjct: 237 SIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTK 296

Query: 122 NSVSPNLAVYTILMKCYCRKRKWILAFSLWMKYMR 18
           +     +  Y  L+    R R++  A   + K +R
Sbjct: 297 DGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 31/133 (23%), Positives = 66/133 (49%)
 Frame = -3

Query: 425 LDSASLQTMVERLCDSGEILKAYKVLKQLANSGVVPNIFTYNILMNGFCKSGDINSAFKL 246
           + S +   ++E   ++G   KA +    + +    P++F +N++++   +      A  +
Sbjct: 126 ISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAV 185

Query: 245 FKDLQLKGYSPDAITYGTLMDGLQRVNREVDALHVFHQMERNSVSPNLAVYTILMKCYCR 66
           +  +     +PD +TYG L+ GL +  +  DAL +F +M    + PN  +Y+I++   C+
Sbjct: 186 YNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQ 245

Query: 65  KRKWILAFSLWMK 27
            +K   A  L+ K
Sbjct: 246 AKKIFDAQRLFSK 258