BLASTX nr result

ID: Coptis24_contig00022958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022958
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521786.1| Disease resistance protein RPP13, putative [...    92   2e-16
gb|AEJ72566.1| putative CC-NBS-LRR protein [Malus x domestica]         90   8e-16
ref|XP_002891560.1| hypothetical protein ARALYDRAFT_474150 [Arab...    89   1e-15
ref|XP_003595124.1| Disease resistance RPP8-like protein [Medica...    87   4e-15
ref|XP_002872017.1| predicted protein [Arabidopsis lyrata subsp....    85   2e-14

>ref|XP_002521786.1| Disease resistance protein RPP13, putative [Ricinus communis]
            gi|223538999|gb|EEF40596.1| Disease resistance protein
            RPP13, putative [Ricinus communis]
          Length = 929

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 58/156 (37%), Positives = 81/156 (51%)
 Frame = -2

Query: 845  CLRSLTLNGEVAVEKNSWKSCFMLSLTELRLEVSGSAEDPSDVLGSLPNLKILFLGVYSY 666
            C     L+ E  +EK      F  +L +L L+ S   EDP   L  LPNL+IL L + S+
Sbjct: 768  CPNLYKLHIEGQIEKLPECHQFSSNLAKLNLQGSKLLEDPMMTLEKLPNLRILRLQMDSF 827

Query: 665  KGREMVFSAERFPQLQFLVFHGFSYVENWTVENCAXXXXXXXXXXXPDKLSKLPDGLRSL 486
             G  MV S + FPQL+ L+      +E+W VE  A              +  +PDGLR +
Sbjct: 828  LGTLMVCSDKGFPQLKSLLLCDLPNLEDWKVEEGAMSNLCHLEISNCTSMKMVPDGLRFI 887

Query: 485  THLQIVEIAEQTGRFKDRVEENGEDWDKISHIPSVV 378
            T LQ +EI      FK R+EE G+D+ K+ H+PSV+
Sbjct: 888  TCLQEMEIRSMLKAFKTRLEEGGDDYYKVQHVPSVL 923


>gb|AEJ72566.1| putative CC-NBS-LRR protein [Malus x domestica]
          Length = 968

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 60/159 (37%), Positives = 84/159 (52%)
 Frame = -2

Query: 845  CLRSLTLNGEVAVEKNSWKSCFMLSLTELRLEVSGSAEDPSDVLGSLPNLKILFLGVYSY 666
            C R   L+ E  +EK      F  +L +L L  S   EDP   L  LPNL+IL  G   +
Sbjct: 813  CRRLQKLHVEGRIEKLPEYHQFPPNLAKLTLWGSNLEEDPMPTLERLPNLRILS-GWQMF 871

Query: 665  KGREMVFSAERFPQLQFLVFHGFSYVENWTVENCAXXXXXXXXXXXPDKLSKLPDGLRSL 486
             G++MV S + FP+L+ L+  GFS +E+WT+E  A             KL  +PD LR +
Sbjct: 872  AGKKMVCSNQGFPKLKSLLLRGFSNLEDWTMEEGAMPSLCRLEISSCIKLKMIPDSLRFV 931

Query: 485  THLQIVEIAEQTGRFKDRVEENGEDWDKISHIPSVVVRN 369
              LQ +EI      FK  +   GED+ K+ H+PS+V+RN
Sbjct: 932  KTLQELEI--YGCLFKVNMGSEGEDFYKVQHVPSIVIRN 968


>ref|XP_002891560.1| hypothetical protein ARALYDRAFT_474150 [Arabidopsis lyrata subsp.
            lyrata] gi|297337402|gb|EFH67819.1| hypothetical protein
            ARALYDRAFT_474150 [Arabidopsis lyrata subsp. lyrata]
          Length = 859

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 54/138 (39%), Positives = 69/138 (50%)
 Frame = -2

Query: 782  FMLSLTELRLEVSGSAEDPSDVLGSLPNLKILFLGVYSYKGREMVFSAERFPQLQFLVFH 603
            F   L  LRL   G  +DP  VL  LPNLKIL L   S+ G ++  S   FPQL  L   
Sbjct: 719  FSSDLGALRLWQCGLVDDPFLVLEKLPNLKILQLFEGSFVGSKLCCSKNGFPQLHSLTLS 778

Query: 602  GFSYVENWTVENCAXXXXXXXXXXXPDKLSKLPDGLRSLTHLQIVEIAEQTGRFKDRVEE 423
                +E WTVE+ A             +L  +P+G R L +LQ VEI      FKD++  
Sbjct: 779  ELENLEEWTVEDGAMMRLVSMELKCCKQLKSVPEGTRFLKNLQEVEIGNMKKAFKDKLIS 838

Query: 422  NGEDWDKISHIPSVVVRN 369
             GED+ K+ H+P VV  N
Sbjct: 839  GGEDFYKVQHVPCVVFEN 856


>ref|XP_003595124.1| Disease resistance RPP8-like protein [Medicago truncatula]
            gi|355484172|gb|AES65375.1| Disease resistance RPP8-like
            protein [Medicago truncatula]
          Length = 928

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 47/133 (35%), Positives = 76/133 (57%)
 Frame = -2

Query: 770  LTELRLEVSGSAEDPSDVLGSLPNLKILFLGVYSYKGREMVFSAERFPQLQFLVFHGFSY 591
            L +L+L+ SG   DP   L  LPNL++L L + S+ G++MV S++ FPQL+ LV    S 
Sbjct: 792  LAKLKLQGSGLVADPMTTLEKLPNLRLLELQLDSFLGKQMVCSSKGFPQLRSLVLSDLSN 851

Query: 590  VENWTVENCAXXXXXXXXXXXPDKLSKLPDGLRSLTHLQIVEIAEQTGRFKDRVEENGED 411
            +E W VE  A             KL  +P+ +R ++ L+ +EI      F+ ++E+ G++
Sbjct: 852  LEQWKVEKGAMCCLGKLEISNCTKLEVVPEEIRFVSSLKDLEIRSMFAAFRIKLEKGGDE 911

Query: 410  WDKISHIPSVVVR 372
              K+ H+PS+V R
Sbjct: 912  HYKVQHVPSLVFR 924


>ref|XP_002872017.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317854|gb|EFH48276.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 926

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 51/153 (33%), Positives = 76/153 (49%)
 Frame = -2

Query: 818  EVAVEKNSWKSCFMLSLTELRLEVSGSAEDPSDVLGSLPNLKILFLGVYSYKGREMVFSA 639
            ++ +EK   +  F   +  + L     +EDP  VL  L NLKI+ L + ++ GR+MV S 
Sbjct: 773  DIKIEKLPNELQFPSRIASISLSSCDLSEDPMPVLEKLHNLKIVSLELNAFTGRKMVCSK 832

Query: 638  ERFPQLQFLVFHGFSYVENWTVENCAXXXXXXXXXXXPDKLSKLPDGLRSLTHLQIVEIA 459
              FP+L  L F     +E W VE  +             KL  LPDGL+ +T L+ + + 
Sbjct: 833  SGFPKLHTLEFSILDNLEEWVVEEESMPFLCRLEINDCRKLKSLPDGLKYITTLEELRVG 892

Query: 458  EQTGRFKDRVEENGEDWDKISHIPSVVVRNFSE 360
                 FKD++ + G+D  KI H+ SVV  N  E
Sbjct: 893  WMQNEFKDKLIQGGDDHYKIQHVSSVVFYNCGE 925


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