BLASTX nr result

ID: Coptis24_contig00022950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022950
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35923.3| unnamed protein product [Vitis vinifera]              140   3e-31
ref|XP_002521366.1| conserved hypothetical protein [Ricinus comm...   134   2e-29
ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261...   132   4e-29
ref|XP_003597554.1| hypothetical protein MTR_2g099520 [Medicago ...   123   4e-26
ref|XP_003546756.1| PREDICTED: uncharacterized protein LOC100811...   113   3e-23

>emb|CBI35923.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  140 bits (352), Expect = 3e-31
 Identities = 92/203 (45%), Positives = 115/203 (56%), Gaps = 2/203 (0%)
 Frame = -1

Query: 623 SSKATSQIMEEDGQTTPFWLQSSTYFNPSNHHQRHRGSSSSICLNSGXXXXXXXXXXXXX 444
           S K T + MEE+G TTPFW+ +S+     +  +R   S SSI L+SG             
Sbjct: 31  SKKNTLETMEEEGATTPFWMPASS----GHRRRRSSRSPSSIFLSSGFLIIFLPLTALLF 86

Query: 443 IFFLVPSFLSFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGRKKDDVESNGDEGIIAS 264
           I F++P  LSFTS +F+PN+VKKSWDSLNLVLVLFAI+CG L R        G  G   S
Sbjct: 87  IVFVLPPILSFTSYIFKPNMVKKSWDSLNLVLVLFAIICGFLSR--------GGGG--GS 136

Query: 263 NVVDEQVHEEPDEQPVQQQWFGYSEQRIHDSTDNSNSDIVG-RLKRSSSSYPDLRQESSW 87
           + ++  V E P+E   +       E+RI        S   G R  RSSSSYPDLRQES+W
Sbjct: 137 SDMESSVSEVPEESTQRSNHGHCYEERI--------SGYGGMRRMRSSSSYPDLRQESAW 188

Query: 86  ASPDENWRFFDDSYVYNQR-LGS 21
           A  D  WR FDD+ + N R LGS
Sbjct: 189 AGGDGRWRSFDDTQLDNHRVLGS 211


>ref|XP_002521366.1| conserved hypothetical protein [Ricinus communis]
           gi|223539444|gb|EEF41034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 553

 Score =  134 bits (337), Expect = 2e-29
 Identities = 84/200 (42%), Positives = 113/200 (56%), Gaps = 7/200 (3%)
 Frame = -1

Query: 599 MEEDGQTTPFWLQSSTYFNPSNHHQ--RHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVP 426
           MEE+    PFWLQ++       HH+  R R  +SSI LNSG             +F +VP
Sbjct: 1   MEEEEDVPPFWLQAT-----DQHHRGRRLRRQASSIFLNSGVILIMLLVIAFVFVFVVVP 55

Query: 425 SFLSFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGRKKDDV--ESNGDEGIIASNVVD 252
           S ++FTSQVF+PNL+KK WDSLN VLVLFAI+CG LGR   +   ES+     ++S+   
Sbjct: 56  SVVTFTSQVFKPNLIKKGWDSLNFVLVLFAIVCGFLGRNSPNTSNESSTSYQRLSSSSSA 115

Query: 251 EQVHEEPDEQ---PVQQQWFGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWAS 81
              + + D Q   P    +  Y + +  D T + N+    RL RS  SYPDLRQES W++
Sbjct: 116 SSSNVQQDVQRSYPSTPAYRWYDDGQYQDRTASYNT--FNRL-RSFRSYPDLRQESLWSN 172

Query: 80  PDENWRFFDDSYVYNQRLGS 21
            DE WRF+DD+ V   +  S
Sbjct: 173 NDERWRFYDDTRVNGYKFSS 192


>ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261010 [Vitis vinifera]
          Length = 555

 Score =  132 bits (333), Expect = 4e-29
 Identities = 87/200 (43%), Positives = 110/200 (55%), Gaps = 5/200 (2%)
 Frame = -1

Query: 599 MEEDGQTTPFWLQSSTYFNPSNHHQRHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVPSF 420
           ME DG +  FW        PS    R R  S    LN               +FF VPSF
Sbjct: 1   MEGDGDSPSFWPSPP----PSTSIYRRRRPSP--LLNPAVLIILLPILAMIVVFFAVPSF 54

Query: 419 LSFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGRKKDD-----VESNGDEGIIASNVV 255
           L+FTSQ  RPN V+KSWDSLN++LVLFAILCG+  RK D+     +E++G  G    +VV
Sbjct: 55  LNFTSQFLRPNSVRKSWDSLNVLLVLFAILCGVFARKNDEKNDDVLENHGSSG----SVV 110

Query: 254 DEQVHEEPDEQPVQQQWFGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPD 75
             + HE      +    F +S+++I+D    S S    RL+RSSSSYPDLRQES W + D
Sbjct: 111 MGKSHES-----ISHSLFEFSDRKIYDPPIQSGS---VRLRRSSSSYPDLRQESLWGAGD 162

Query: 74  ENWRFFDDSYVYNQRLGSSS 15
           +  RFFDD  V N R  +SS
Sbjct: 163 DRRRFFDDFEVNNYRSPASS 182


>ref|XP_003597554.1| hypothetical protein MTR_2g099520 [Medicago truncatula]
           gi|355486602|gb|AES67805.1| hypothetical protein
           MTR_2g099520 [Medicago truncatula]
          Length = 485

 Score =  123 bits (308), Expect = 4e-26
 Identities = 79/195 (40%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
 Frame = -1

Query: 599 MEEDGQ-TTPFWLQSSTYFNPSNHHQRHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVPS 423
           MEE+ Q ++PFWLQ+S        ++R    S S+ L+SG             I  +VP+
Sbjct: 1   MEEEEQISSPFWLQNS------GTNRRRLSRSYSLFLSSGTVIIVLLVIALAFILVIVPT 54

Query: 422 FLSFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGR--KKDDVESNGDEGIIASNVVDE 249
             SF S +F PN VKKSWDSLNL+LVLFAI CG L +    +   S  D+    S+   +
Sbjct: 55  LHSFASHIFNPNSVKKSWDSLNLLLVLFAIFCGFLSKNNNNESPRSYEDQNQTFSDTNTQ 114

Query: 248 QVHEEPDEQP--VQQQWFGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPD 75
           Q +E+P+ +P    + W+ YSE R              RL RS +SYPDLRQES W + D
Sbjct: 115 QEYEKPNPEPETAPRFWYEYSEDRTS----------YNRL-RSFNSYPDLRQESLWIAGD 163

Query: 74  ENWRFFDDSYVYNQR 30
           E WRF DD++V   R
Sbjct: 164 EQWRFSDDTHVNRYR 178


>ref|XP_003546756.1| PREDICTED: uncharacterized protein LOC100811539 [Glycine max]
          Length = 419

 Score =  113 bits (283), Expect = 3e-23
 Identities = 68/189 (35%), Positives = 98/189 (51%)
 Frame = -1

Query: 596 EEDGQTTPFWLQSSTYFNPSNHHQRHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVPSFL 417
           EE+  + PFW +S          +R    S S+ L+S              +  ++P+  
Sbjct: 5   EEEDTSPPFWTESGG--------RRRLRRSYSLFLSSSAPLICLLVIALAFMLVIIPTLH 56

Query: 416 SFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGRKKDDVESNGDEGIIASNVVDEQVHE 237
           SFT+Q+F+PN VKKSWDSLN VL+LFAILCG L R      SN +E     +  D  +  
Sbjct: 57  SFTTQIFKPNSVKKSWDSLNFVLILFAILCGFLSRN----NSNTNE-----SFSDTPLEY 107

Query: 236 EPDEQPVQQQWFGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPDENWRFF 57
           +    P+ + W+  S++  + S +           RS SS+PDLRQES W + DE WRF+
Sbjct: 108 DKPNPPLPRPWYEESDRTPYKSYNR---------LRSFSSHPDLRQESQWLAADERWRFY 158

Query: 56  DDSYVYNQR 30
           DD++V   R
Sbjct: 159 DDTHVNGYR 167


Top