BLASTX nr result

ID: Coptis24_contig00022947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022947
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275068.1| PREDICTED: uncharacterized protein LOC100262...    87   3e-15
emb|CAN74687.1| hypothetical protein VITISV_020417 [Vitis vinifera]    87   3e-15
ref|XP_002330192.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
emb|CBI36924.3| unnamed protein product [Vitis vinifera]               64   3e-08
ref|XP_003591203.1| Pheromone receptor-like protein [Medicago tr...    63   4e-08

>ref|XP_002275068.1| PREDICTED: uncharacterized protein LOC100262334 [Vitis vinifera]
          Length = 403

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 67/175 (38%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
 Frame = +3

Query: 81  GSMISADELFLNGQIRPMKLSSHLQRPQVLAP---XXXXXXXXXXXXXNKFVRREESMVX 251
           GSM SADELFLNGQIRPMKLSSHLQRPQ+LAP                 +F +RE S+V 
Sbjct: 105 GSMSSADELFLNGQIRPMKLSSHLQRPQILAPLMDLEGEEEDEESKDGEEFEKRERSVVR 164

Query: 252 XXXXXXXXXXXXXXXXXXXXXXDSPSFPFQW-----------CXXXXXXXXXXXXXXXXT 398
                                 ++    F+W                            T
Sbjct: 165 GRDLRLRNRSMHRKARSMSPLRNA---AFEWHEEPVRGEQEEVNERALDSEELECEKTDT 221

Query: 399 VSTGTTPXXXXXXXXXXXXXXXXKRWEFLKDFL-RSKSEGRGGNVKEKFWYSLSF 560
            ST TTP                K+W FLKD L RSKSEGR GN KEKFW S+SF
Sbjct: 222 PSTETTPSGSASSSRSSSSGRNSKKWVFLKDLLYRSKSEGR-GNSKEKFWSSISF 275


>emb|CAN74687.1| hypothetical protein VITISV_020417 [Vitis vinifera]
          Length = 444

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 67/175 (38%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
 Frame = +3

Query: 81  GSMISADELFLNGQIRPMKLSSHLQRPQVLAP---XXXXXXXXXXXXXNKFVRREESMVX 251
           GSM SADELFLNGQIRPMKLSSHLQRPQ+LAP                 +F +RE S+V 
Sbjct: 105 GSMSSADELFLNGQIRPMKLSSHLQRPQILAPLMDLEGEEEDEESKDGEEFEKRERSVVR 164

Query: 252 XXXXXXXXXXXXXXXXXXXXXXDSPSFPFQW-----------CXXXXXXXXXXXXXXXXT 398
                                 ++    F+W                            T
Sbjct: 165 GRDLRLRNRSMHRKARSMSPLRNA---AFEWHEEPVRGEQEEVNERALDSEELECEKTDT 221

Query: 399 VSTGTTPXXXXXXXXXXXXXXXXKRWEFLKDFL-RSKSEGRGGNVKEKFWYSLSF 560
            ST TTP                K+W FLKD L RSKSEGR GN KEKFW S+SF
Sbjct: 222 PSTETTPSGSASSSRSSSSGRNSKKWVFLKDLLYRSKSEGR-GNSKEKFWSSISF 275


>ref|XP_002330192.1| predicted protein [Populus trichocarpa] gi|222871648|gb|EEF08779.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 81  GSMISADELFLNGQIRPMKLSSHLQRPQVLAP 176
           GSM SADELFLNGQIRPMKLSSHLQRPQVLAP
Sbjct: 121 GSMSSADELFLNGQIRPMKLSSHLQRPQVLAP 152


>emb|CBI36924.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = +3

Query: 81  GSMISADELFLNGQIRPMKLSSHLQRPQVLAP 176
           GSM SADELFLNGQIRPMKLSSHLQRPQ+LAP
Sbjct: 79  GSMSSADELFLNGQIRPMKLSSHLQRPQILAP 110


>ref|XP_003591203.1| Pheromone receptor-like protein [Medicago truncatula]
           gi|355480251|gb|AES61454.1| Pheromone receptor-like
           protein [Medicago truncatula]
          Length = 461

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = +3

Query: 81  GSMISADELFLNGQIRPMKLSSHLQRPQVLAP 176
           GSM SADELFLNGQIRPMKLSSHL+RPQVLAP
Sbjct: 105 GSMTSADELFLNGQIRPMKLSSHLERPQVLAP 136


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