BLASTX nr result

ID: Coptis24_contig00022943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022943
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40314.3| unnamed protein product [Vitis vinifera]              219   2e-55
ref|XP_003529953.1| PREDICTED: uncharacterized protein LOC100790...   217   9e-55
ref|XP_002511829.1| conserved hypothetical protein [Ricinus comm...   208   4e-52
ref|XP_002302575.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_002272448.2| PREDICTED: uncharacterized protein LOC100253...   202   2e-50

>emb|CBI40314.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  219 bits (558), Expect = 2e-55
 Identities = 110/168 (65%), Positives = 136/168 (80%)
 Frame = +2

Query: 11  VEMEETGEVYNCEIKLRENVERRKEKVKIGCGAGFAGDRPLAALKLLQRVEHLDYIVLEC 190
           ++ ++  EV++C IKLR N +RR EKV IGCGAGF GDRPLAALKLLQRV+ L+Y+VLEC
Sbjct: 1   MDNKDRDEVHDCVIKLRVNPQRRSEKVYIGCGAGFGGDRPLAALKLLQRVKELNYLVLEC 60

Query: 191 LAERTLADRYQLMLSGDVGYDPRISEWMSLLLPLALEKGTCIITNMGAIDPIGARKKVLD 370
           LAERTLA+RYQ+M+SG  GYD RIS+WM +LLPLA E+GTCIITNMGA+DP GA++KVL+
Sbjct: 61  LAERTLAERYQVMVSGGDGYDSRISDWMHVLLPLATERGTCIITNMGAMDPPGAQEKVLE 120

Query: 371 IANSMGLCITXXXXXXXXXXXSGMRSLLERSYIMEGGVSTYLGAAPIV 514
           IA+++GL IT           SG+ S  ++SYIMEGG STYLGAAPIV
Sbjct: 121 IASNLGLSITVAVAHEVALENSGLESPPKQSYIMEGGKSTYLGAAPIV 168


>ref|XP_003529953.1| PREDICTED: uncharacterized protein LOC100790647 [Glycine max]
          Length = 644

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/169 (64%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
 Frame = +2

Query: 11  VEMEETGEVYNCEIKLRENVERRKEKVKIGCGAGFAGDRPLAALKLLQRVEHLDYIVLEC 190
           +E  +  E++NC IKLR N ERR++KV IGCGAGF GD+PLAALKLLQRV+ L+Y+VLEC
Sbjct: 1   MEPHDEEEIHNCLIKLRSNPERRRDKVYIGCGAGFGGDKPLAALKLLQRVQELNYLVLEC 60

Query: 191 LAERTLADRYQLMLSGDVGYDPRISEWMSLLLPLALEKGTCIITNMGAIDPIGARKKVLD 370
           LAERTLADRYQ+M+SG  GYD +IS WM +LLPLALE+GTCIITNMGA+DP+GA++KVL+
Sbjct: 61  LAERTLADRYQIMMSGGDGYDSQISNWMHMLLPLALERGTCIITNMGAMDPLGAQQKVLE 120

Query: 371 IANSMGLCIT-XXXXXXXXXXXSGMRSLLERSYIMEGGVSTYLGAAPIV 514
           IANS+GL ++             G      +SYIMEGG+STYLGAAPIV
Sbjct: 121 IANSLGLNVSVAVAHEVSVTNIVGSGFSPAKSYIMEGGISTYLGAAPIV 169


>ref|XP_002511829.1| conserved hypothetical protein [Ricinus communis]
           gi|223549009|gb|EEF50498.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 607

 Score =  208 bits (529), Expect = 4e-52
 Identities = 104/169 (61%), Positives = 133/169 (78%), Gaps = 1/169 (0%)
 Frame = +2

Query: 11  VEMEETGEVYNCEIKLRENVERRKEKVKIGCGAGFAGDRPLAALKLLQRVEHLDYIVLEC 190
           +E ++  +++NC IKLR+N ERR+EKV IGCGAGF GDRP AALKLL+RV+ L+Y+VLEC
Sbjct: 1   MEYQDRNDIHNCVIKLRKNPERRREKVYIGCGAGFGGDRPSAALKLLERVKELNYLVLEC 60

Query: 191 LAERTLADRYQLMLSGDVGYDPRISEWMSLLLPLALEKGTCIITNMGAIDPIGARKKVLD 370
           LAERTLADR+Q+M+SG  G+D RIS+WMSLLLPLA+E+ TCIITNMGA+DP+GA+  VL+
Sbjct: 61  LAERTLADRFQIMISGGDGFDSRISDWMSLLLPLAVERRTCIITNMGAMDPVGAQDSVLE 120

Query: 371 IANSMGLCITXXXXXXXXXXXSGMRSLLERSYIMEG-GVSTYLGAAPIV 514
           +A+++GL I+           SG  S    S IMEG  +STYLGAAPIV
Sbjct: 121 VASNLGLSISVAVACEVSFNKSGSGSPPRESNIMEGKAISTYLGAAPIV 169


>ref|XP_002302575.1| predicted protein [Populus trichocarpa] gi|222844301|gb|EEE81848.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score =  204 bits (518), Expect = 8e-51
 Identities = 101/152 (66%), Positives = 126/152 (82%)
 Frame = +2

Query: 59  RENVERRKEKVKIGCGAGFAGDRPLAALKLLQRVEHLDYIVLECLAERTLADRYQLMLSG 238
           RE  ++R+EKV IGCGAGF GDRP AALKLLQRV+ L+YIVLECLAERTLADRYQ+M+SG
Sbjct: 1   REKPKKRREKVYIGCGAGFGGDRPTAALKLLQRVKELNYIVLECLAERTLADRYQIMISG 60

Query: 239 DVGYDPRISEWMSLLLPLALEKGTCIITNMGAIDPIGARKKVLDIANSMGLCITXXXXXX 418
             GYD RI++WM LLLPLA+E+GTCIITNMGA+DP+GA++KV+++A+S+GL ++      
Sbjct: 61  GDGYDSRITDWMRLLLPLAVERGTCIITNMGAMDPVGAQEKVVELASSLGLGVS-VAVAH 119

Query: 419 XXXXXSGMRSLLERSYIMEGGVSTYLGAAPIV 514
                SG  S  ++SYIMEGG+STYLGAAPIV
Sbjct: 120 EMFSFSGSGSSTKKSYIMEGGISTYLGAAPIV 151


>ref|XP_002272448.2| PREDICTED: uncharacterized protein LOC100253419 [Vitis vinifera]
          Length = 641

 Score =  202 bits (515), Expect = 2e-50
 Identities = 105/168 (62%), Positives = 130/168 (77%)
 Frame = +2

Query: 11  VEMEETGEVYNCEIKLRENVERRKEKVKIGCGAGFAGDRPLAALKLLQRVEHLDYIVLEC 190
           ++ ++  EV++C IKLR N +RR EKV IGCGAGF GDRPLAALKLLQRV+ L+Y+VLEC
Sbjct: 1   MDNKDRDEVHDCVIKLRVNPQRRSEKVYIGCGAGFGGDRPLAALKLLQRVKELNYLVLEC 60

Query: 191 LAERTLADRYQLMLSGDVGYDPRISEWMSLLLPLALEKGTCIITNMGAIDPIGARKKVLD 370
           LAERTLA+RYQ+M+SG  GYD RIS+WM +LLPLA E+GTCIITNMGA+DP GA++KVL+
Sbjct: 61  LAERTLAERYQVMVSGGDGYDSRISDWMHVLLPLATERGTCIITNMGAMDPPGAQEKVLE 120

Query: 371 IANSMGLCITXXXXXXXXXXXSGMRSLLERSYIMEGGVSTYLGAAPIV 514
           IA+++GL IT           SG+         M+GG STYLGAAPIV
Sbjct: 121 IASNLGLSITVAVAHEVALENSGISWT-----SMKGGKSTYLGAAPIV 163


Top