BLASTX nr result

ID: Coptis24_contig00022935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022935
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306301.1| predicted protein [Populus trichocarpa] gi|2...   267   2e-69
ref|XP_004146929.1| PREDICTED: uncharacterized protein LOC101211...   259   4e-67
ref|XP_003552038.1| PREDICTED: uncharacterized protein LOC100790...   256   6e-66
ref|XP_003538612.1| PREDICTED: uncharacterized protein LOC100785...   253   5e-65
gb|AAS49112.1| At5g10320 [Arabidopsis thaliana] gi|51970514|dbj|...   249   5e-64

>ref|XP_002306301.1| predicted protein [Populus trichocarpa] gi|222855750|gb|EEE93297.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  267 bits (683), Expect = 2e-69
 Identities = 142/277 (51%), Positives = 192/277 (69%), Gaps = 10/277 (3%)
 Frame = +3

Query: 78  QKMVSSMRAH--------DNNESTRFLADFFLFIVKPYGTLDMKKKFTLISEITPKISPD 233
           Q+M++ M +H        +N+ S RFLA+  L +++  G LD K K TLI++  PKIS  
Sbjct: 11  QRMITLMESHALLSSPSSNNHHSNRFLANLLLLLIQQCGDLDFKDKLTLINQHLPKISGS 70

Query: 234 FLQEEQVLFSCDGQDEQFSSPYLTEHCVNNESNLSKREEMPMVGLDAMQRANSTLEDFCR 413
           FL+E  +LF+ +    Q  S  +     N+ S+L   E+M +VGLDAMQRANSTLEDFCR
Sbjct: 71  FLEEVSLLFNREEAVLQTESKLIA----NSNSDL---EDMALVGLDAMQRANSTLEDFCR 123

Query: 414 SYFMFHGMDVNKPESVFRHLPVLSFTESYIYQLDSFNEELVNISGKI--SVGNTSNTEKN 587
           SYFMFH MD+NKP+S+F++LP+LSFTESYIYQ+DS NE++VN+   I  +V    + E +
Sbjct: 124 SYFMFHEMDINKPQSIFKYLPLLSFTESYIYQMDSLNEKIVNMQTNIVGAVERKPHMEVS 183

Query: 588 EKLADHIVKAFQTGALRPLIFVLERHGLMTDRIRVELSFGEEYWALERKLCHALVSRKKI 767
           E      +   +     PL+  L+ HGL+T+RI  EL FGEEYW LERKLC ALV++ +I
Sbjct: 184 ESWIGKFIDMLKKDPFGPLVGQLQHHGLLTERINEELRFGEEYWDLERKLCSALVNQTEI 243

Query: 768 SIEDVMRAIHLKSFDYRVLSLLLYQLKETQVNEMHMD 878
            +EDVMRAIHLKSFDYRVL+LLLYQL+  +VN++HM+
Sbjct: 244 LVEDVMRAIHLKSFDYRVLNLLLYQLRGEKVNDVHME 280


>ref|XP_004146929.1| PREDICTED: uncharacterized protein LOC101211687 [Cucumis sativus]
           gi|449513163|ref|XP_004164249.1| PREDICTED:
           uncharacterized LOC101211687 [Cucumis sativus]
          Length = 395

 Score =  259 bits (663), Expect = 4e-67
 Identities = 142/260 (54%), Positives = 183/260 (70%), Gaps = 4/260 (1%)
 Frame = +3

Query: 111 NNESTRFLADFFLFIVKPYGTLDMKKKFTLISEITPKISPDFLQEEQVLFSCDGQDEQFS 290
           ++ S RF+A+F L +V+P G LD   KF L+SE  PK S +FL +  +L        +  
Sbjct: 27  SSSSNRFIANFLLLLVQPCGELDFDDKFDLVSEYMPKFSEEFLGDVSLLLGDGDYRGKEM 86

Query: 291 SPYLTEHCVNNESNLSKRE----EMPMVGLDAMQRANSTLEDFCRSYFMFHGMDVNKPES 458
              L  +C +N+ +L   +    EM MVGLDAMQRANSTLEDF RSYFMFHGMD NKP+S
Sbjct: 87  ENTLQPYC-DNKLDLGSSQNYCGEMAMVGLDAMQRANSTLEDFFRSYFMFHGMDANKPQS 145

Query: 459 VFRHLPVLSFTESYIYQLDSFNEELVNISGKISVGNTSNTEKNEKLADHIVKAFQTGALR 638
           VF++ P+LSFTESYIYQLD+ NE++V   G  + G +  T  NEK +  I+ A ++  L+
Sbjct: 146 VFKYFPILSFTESYIYQLDTLNEKIV--LGGFAFGESQET--NEK-STKILSAIRSDPLQ 200

Query: 639 PLIFVLERHGLMTDRIRVELSFGEEYWALERKLCHALVSRKKISIEDVMRAIHLKSFDYR 818
           PLI +L+ HGL+TDR+  EL  GEEYWALER LC AL S  K+SIEDVMRAIHLKSFDYR
Sbjct: 201 PLINLLKSHGLLTDRLVHELRSGEEYWALERDLCGALASNGKVSIEDVMRAIHLKSFDYR 260

Query: 819 VLSLLLYQLKETQVNEMHMD 878
           VL+LLLYQL+  +VN++HM+
Sbjct: 261 VLNLLLYQLRGKKVNDLHME 280


>ref|XP_003552038.1| PREDICTED: uncharacterized protein LOC100790010 [Glycine max]
          Length = 405

 Score =  256 bits (653), Expect = 6e-66
 Identities = 140/284 (49%), Positives = 189/284 (66%), Gaps = 16/284 (5%)
 Frame = +3

Query: 75  VQKMVSSMRAHD------NNESTRFLADFFLFIVKPYGTLDMKKKFTLISEITPKISPDF 236
           VQ M+  M +H       +  S RFLA+F LF+++P G L +  K +L+S   P +S  F
Sbjct: 10  VQSMLEFMESHSRGVSNSDQHSNRFLANFILFLIEPCGDLSINHKCSLLSHFIPTLSSAF 69

Query: 237 LQE--EQVLFSCDGQDEQ--FSSPYLTEHCVN----NESNLSKR--EEMPMVGLDAMQRA 386
           L++  +  LF+   Q     F    +    ++     E +L +R  E   MVGLD+MQ A
Sbjct: 70  LEDAYQHHLFTTSKQQNSGGFQQSLVGNSLLSCNQMKEYSLLQRCNENAAMVGLDSMQMA 129

Query: 387 NSTLEDFCRSYFMFHGMDVNKPESVFRHLPVLSFTESYIYQLDSFNEELVNISGKISVGN 566
           NSTLEDFCRSYFMFHG+DV+KP+S+F++LP+LSFTESYIYQLD  NE+L+        GN
Sbjct: 130 NSTLEDFCRSYFMFHGLDVSKPQSIFKYLPILSFTESYIYQLDKMNEKLLQTPCN---GN 186

Query: 567 TSNTEKNEKLADHIVKAFQTGALRPLIFVLERHGLMTDRIRVELSFGEEYWALERKLCHA 746
               EK+E+    +V  F    +RPL+ +LE  GL+T+RIR EL  GEEYWALERKLC A
Sbjct: 187 CVFGEKDERETKVLVSCFSNEPVRPLVSILEHKGLLTERIREELRLGEEYWALERKLCSA 246

Query: 747 LVSRKKISIEDVMRAIHLKSFDYRVLSLLLYQLKETQVNEMHMD 878
           L ++++I +EDVM+AIHLKSFDYRVL+LLLYQL+ T+V E+HM+
Sbjct: 247 LTNKEEILVEDVMKAIHLKSFDYRVLNLLLYQLQGTKVEELHME 290


>ref|XP_003538612.1| PREDICTED: uncharacterized protein LOC100785618 [Glycine max]
          Length = 403

 Score =  253 bits (645), Expect = 5e-65
 Identities = 136/279 (48%), Positives = 185/279 (66%), Gaps = 23/279 (8%)
 Frame = +3

Query: 111 NNESTRFLADFFLFIVKPYGTLDMKKKFTLISEITPKISPDFLQE--------------- 245
           ++ S RFLA+F LF+++P G L +  K +L+S++ P +S  FL++               
Sbjct: 26  DHHSNRFLANFILFLIEPSGDLAINDKCSLLSQLIPTLSSSFLEDAYQHHLDTTKRENSG 85

Query: 246 ------EQVLFSCDGQDEQFSSPYLTEHCVNNESNLSKREEMPMVGLDAMQRANSTLEDF 407
                 E  L  C+ Q +++SS    ++C  N +         MVGLD+MQ ANSTLEDF
Sbjct: 86  FQQSLVENALLGCN-QTKEYSS---LQNCNENTA---------MVGLDSMQMANSTLEDF 132

Query: 408 CRSYFMFHGMDVNKPESVFRHLPVLSFTESYIYQLDSFNEELVNI--SGKISVGNTSNTE 581
           CRSYFMFHG+DV+KP+S+F++LP+LSFTESYIYQLD  NE+L+    +GK   G     +
Sbjct: 133 CRSYFMFHGLDVSKPQSIFKYLPILSFTESYIYQLDKMNEKLLQTPYNGKCVFGEKDEWQ 192

Query: 582 KNEKLADHIVKAFQTGALRPLIFVLERHGLMTDRIRVELSFGEEYWALERKLCHALVSRK 761
           +  KL   +V  F    +RPL  +LE  GL+T+RIR EL  GEEYWALERKLC AL +++
Sbjct: 193 RETKL---LVSCFSNDPVRPLATILEHKGLLTERIREELRLGEEYWALERKLCSALTNKE 249

Query: 762 KISIEDVMRAIHLKSFDYRVLSLLLYQLKETQVNEMHMD 878
           KI +EDVM+AIHLKSFDYRVL+LLLYQL+ T+V E+HM+
Sbjct: 250 KILVEDVMKAIHLKSFDYRVLNLLLYQLQGTKVEELHME 288


>gb|AAS49112.1| At5g10320 [Arabidopsis thaliana] gi|51970514|dbj|BAD43949.1|
           putative protein [Arabidopsis thaliana]
          Length = 402

 Score =  249 bits (637), Expect = 5e-64
 Identities = 142/287 (49%), Positives = 192/287 (66%), Gaps = 20/287 (6%)
 Frame = +3

Query: 78  QKMVSSMRAH--------DNNESTRFLADFFLFIVKPYGTLDMKKKFTLISEITPKISPD 233
           Q +VSS+  H        D+  S+RFL++  LF+V+P G LD+  K  L+SE  PKIS  
Sbjct: 11  QTVVSSITCHGLLSSSSSDSASSSRFLSNLVLFLVQPCGELDLDSKLGLLSEFLPKISGP 70

Query: 234 FLQEEQVLFSCDGQDEQFSSPYLTEHCVNNESNLS------------KREEMPMVGLDAM 377
           FL+E  +  S +  DE  +       C N+    S            ++E + MVGLDAM
Sbjct: 71  FLEE--ISRSLELDDEATTPLNTISECQNSCVKRSVMDNVDPYMSQKRQEVVAMVGLDAM 128

Query: 378 QRANSTLEDFCRSYFMFHGMDVNKPESVFRHLPVLSFTESYIYQLDSFNEELVNISGKIS 557
           +RANSTLEDF RSYFMFH +D+N+P+S+FR+LPVLSFTESYIYQ+D+ NE++V+ S   +
Sbjct: 129 KRANSTLEDFSRSYFMFHRLDINEPQSIFRYLPVLSFTESYIYQMDALNEKIVSES---A 185

Query: 558 VGNTSNTEKNEKLADHIVKAFQTGALRPLIFVLERHGLMTDRIRVELSFGEEYWALERKL 737
            G+      +   A+  V  F+T  L+PL  +LER  L+T+R++ E + GEEYWALERKL
Sbjct: 186 CGSQVIYSSHGWNAESRV-LFETNPLKPLGDLLEREALLTNRVQQEFNSGEEYWALERKL 244

Query: 738 CHALVSRKKISIEDVMRAIHLKSFDYRVLSLLLYQLKETQVNEMHMD 878
           CHAL ++ KI +EDVMRAIHLKSFDYRVL+LLLY+L+  +VNE+HMD
Sbjct: 245 CHALSNKNKICLEDVMRAIHLKSFDYRVLNLLLYKLRGEEVNELHMD 291


Top