BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022932
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
emb|CBI38165.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...    73   3e-11
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11

>ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|222853423|gb|EEE90970.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/70 (55%), Positives = 51/70 (72%)
 Frame = +3

Query: 3   RRGVVKQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILAAQMKRTRYVLDVGHPES 182
           RRGVVKQPG SWI+I + VHVFMVKDK HPQ+KE+Y +L +L   M++  YV D    E+
Sbjct: 627 RRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDASDHEA 686

Query: 183 KTYKEPMEMD 212
             Y+EP E++
Sbjct: 687 --YEEPSELE 694


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 32/60 (53%), Positives = 45/60 (75%)
 Frame = +3

Query: 3   RRGVVKQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILAAQMKRTRYVLDVGHPES 182
           ++GV KQPG SWIE+ ++VHVF+VKDK+HP RK++Y +L +L  QMKR  Y+ D    E+
Sbjct: 587 QQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEA 646


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 32/60 (53%), Positives = 45/60 (75%)
 Frame = +3

Query: 3   RRGVVKQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILAAQMKRTRYVLDVGHPES 182
           ++GV KQPG SWIE+ ++VHVF+VKDK+HP RK++Y +L +L  QMKR  Y+ D    E+
Sbjct: 617 QQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEA 676


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%)
 Frame = +3

Query: 9   GVVKQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILAAQMKRTRYVLDVGHPESKT 188
           GV+KQPG SWI I + +HVFMVKDK HP +K++Y +L IL  QMKR  YV +    + + 
Sbjct: 624 GVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEA--DDDEP 681

Query: 189 YKEPMEMDI 215
           Y+E  + ++
Sbjct: 682 YEEESDSEL 690


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/90 (44%), Positives = 53/90 (58%)
 Frame = +3

Query: 3   RRGVVKQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILAAQMKRTRYVLDVGHPES 182
           +RGV+KQPG SWIEI ++VHVFMVKDK HP +K+++ +L  L  QMK   YV        
Sbjct: 622 QRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYV-------- 673

Query: 183 KTYKEPMEMDIREGCIAE*FSQMVVQFETD 272
                  E D  E C  E  S++V+ FE +
Sbjct: 674 ------PEADDDEICEEESDSELVLHFEME 697