BLASTX nr result

ID: Coptis24_contig00022931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022931
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283165.1| PREDICTED: uncharacterized protein LOC100249...   152   3e-35
ref|XP_002330826.1| predicted protein [Populus trichocarpa] gi|2...   144   9e-33
ref|XP_004138779.1| PREDICTED: uncharacterized protein LOC101209...   136   2e-30
ref|XP_002878752.1| hypothetical protein ARALYDRAFT_481294 [Arab...   131   6e-29
ref|NP_850052.1| chaperone protein dnaJ-related protein [Arabido...   131   6e-29

>ref|XP_002283165.1| PREDICTED: uncharacterized protein LOC100249288 isoform 1 [Vitis
           vinifera] gi|296081792|emb|CBI20797.3| unnamed protein
           product [Vitis vinifera]
          Length = 101

 Score =  152 bits (385), Expect = 3e-35
 Identities = 71/97 (73%), Positives = 80/97 (82%), Gaps = 3/97 (3%)
 Frame = +2

Query: 95  VLPSSSTNRPSFR---PLRFSSVQQTQQQDEVGIMCEPCSGKGWLLCGFCNGQKTNVKAE 265
           +LPSSS++    R   P   + +QQ Q+Q +VGIMCEPC+GKGWLLC FC GQKTNVKAE
Sbjct: 1   MLPSSSSSTMGMRFLKPPHCAPLQQIQEQIDVGIMCEPCNGKGWLLCDFCKGQKTNVKAE 60

Query: 266 NNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDGE 376
           NNRIYRRCPSCRAIGYVLCSKCKVFKCVTFP+  DGE
Sbjct: 61  NNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPNYDDGE 97


>ref|XP_002330826.1| predicted protein [Populus trichocarpa] gi|222872628|gb|EEF09759.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  144 bits (363), Expect = 9e-33
 Identities = 70/116 (60%), Positives = 85/116 (73%), Gaps = 8/116 (6%)
 Frame = +2

Query: 53  MAFTLLSTKVKMIQVLPS--SSTNRPSF-RPLRFS-----SVQQTQQQDEVGIMCEPCSG 208
           +  T+   K+  ++ LPS  ++T  P F +P+  S      VQ+ QQQ   GIMCEPC+G
Sbjct: 2   LTVTVAPAKISYLRSLPSWPANTTTPRFLKPVNCSPPLQQQVQEEQQQVASGIMCEPCNG 61

Query: 209 KGWLLCGFCNGQKTNVKAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDGE 376
           KGWLLC FC G KTNVKA+N R+YRRCPSCRAIGYVLCSKCKVFKCVTFP+ +DGE
Sbjct: 62  KGWLLCDFCKGLKTNVKADNKRLYRRCPSCRAIGYVLCSKCKVFKCVTFPNYNDGE 117


>ref|XP_004138779.1| PREDICTED: uncharacterized protein LOC101209431 [Cucumis sativus]
           gi|449499504|ref|XP_004160834.1| PREDICTED:
           uncharacterized LOC101209431 [Cucumis sativus]
          Length = 112

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/101 (61%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
 Frame = +2

Query: 74  TKVKMIQVLPS-SSTNRPSFRPLRFSSVQQTQQQDEVGIMCEPCSGKGWLLCGFCNGQKT 250
           TK+ +++  PS SS+ R SF   R S +QQ Q    +   CEPC+GKGW++C FC GQKT
Sbjct: 9   TKINLVRFSPSRSSSPRSSFNFARCSPIQQVQADSTID--CEPCNGKGWIVCDFCEGQKT 66

Query: 251 NVKAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDG 373
           NVK E NRIYRRCP+CRA+GYVLCS CKVFKCVTFP+ +DG
Sbjct: 67  NVKVEKNRIYRRCPTCRAVGYVLCSNCKVFKCVTFPNFNDG 107


>ref|XP_002878752.1| hypothetical protein ARALYDRAFT_481294 [Arabidopsis lyrata subsp.
           lyrata] gi|297324591|gb|EFH55011.1| hypothetical protein
           ARALYDRAFT_481294 [Arabidopsis lyrata subsp. lyrata]
          Length = 126

 Score =  131 bits (330), Expect = 6e-29
 Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 8/100 (8%)
 Frame = +2

Query: 101 PSSSTNRPSFRPLRFSSVQQTQQQ--------DEVGIMCEPCSGKGWLLCGFCNGQKTNV 256
           PS  ++R   +P R   +QQ + Q        DE  I+CE C+GKGWL+C  CNGQKTNV
Sbjct: 23  PSPRSHRCLLKPFRCVPLQQQEPQLEQSQQGDDEAVILCEDCNGKGWLICDVCNGQKTNV 82

Query: 257 KAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDGE 376
           K+ENNRIYRRCP+C+A+G+VLC KCKVFKCVTFP+  DG+
Sbjct: 83  KSENNRIYRRCPTCKAVGFVLCRKCKVFKCVTFPNSEDGD 122


>ref|NP_850052.1| chaperone protein dnaJ-related protein [Arabidopsis thaliana]
           gi|44917527|gb|AAS49088.1| At2g24395 [Arabidopsis
           thaliana] gi|62321035|dbj|BAD94100.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330252477|gb|AEC07571.1| chaperone protein
           dnaJ-related protein [Arabidopsis thaliana]
          Length = 132

 Score =  131 bits (330), Expect = 6e-29
 Identities = 60/104 (57%), Positives = 75/104 (72%), Gaps = 12/104 (11%)
 Frame = +2

Query: 101 PSSSTNRPS----FRPLRFSSVQQTQQQ--------DEVGIMCEPCSGKGWLLCGFCNGQ 244
           P+SST+R      F+P R   +Q+ + Q        D   I+CE C+GKGWLLC FC GQ
Sbjct: 25  PASSTSRRKQRRLFKPFRCVPLQEQEPQLDQSQQGDDNAVILCEDCNGKGWLLCDFCKGQ 84

Query: 245 KTNVKAENNRIYRRCPSCRAIGYVLCSKCKVFKCVTFPDDSDGE 376
           KTNVK+ENNRIYRRCP+C+A+G+VLC KCKVFKCVTFP+  DG+
Sbjct: 85  KTNVKSENNRIYRRCPTCKAVGFVLCRKCKVFKCVTFPNSEDGD 128


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