BLASTX nr result
ID: Coptis24_contig00022930
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022930 (650 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 165 6e-39 gb|ABK22541.1| unknown [Picea sitchensis] 163 2e-38 gb|AFK45150.1| unknown [Lotus japonicus] 162 4e-38 ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo... 162 4e-38 gb|ACU13643.1| unknown [Glycine max] 162 4e-38 >ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis vinifera] gi|296083390|emb|CBI23345.3| unnamed protein product [Vitis vinifera] Length = 88 Score = 165 bits (418), Expect = 6e-39 Identities = 78/85 (91%), Positives = 84/85 (98%) Frame = +3 Query: 78 ASVPVNPKPFLNNLTGKPVKVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGSLG 257 A+VP+NPKPFLNNLTGKPV VKLKWGMEYKGYLVSVDSYMNLQLAN+EEYIDG+FTG+LG Sbjct: 2 ATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNLG 61 Query: 258 EILIRCNNVLYLRGVPEDEDIEEAD 332 EILIRCNNVLYLRGVPEDE+IEEAD Sbjct: 62 EILIRCNNVLYLRGVPEDEEIEEAD 86 >gb|ABK22541.1| unknown [Picea sitchensis] Length = 84 Score = 163 bits (413), Expect = 2e-38 Identities = 77/83 (92%), Positives = 82/83 (98%) Frame = +3 Query: 78 ASVPVNPKPFLNNLTGKPVKVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGSLG 257 A+VPVNPKPFLNNLTGKPV VKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDG+FTG+LG Sbjct: 2 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLG 61 Query: 258 EILIRCNNVLYLRGVPEDEDIEE 326 E+LIRCNNVLYLRGVPEDEDIEE Sbjct: 62 EVLIRCNNVLYLRGVPEDEDIEE 84 >gb|AFK45150.1| unknown [Lotus japonicus] Length = 88 Score = 162 bits (411), Expect = 4e-38 Identities = 76/84 (90%), Positives = 83/84 (98%) Frame = +3 Query: 78 ASVPVNPKPFLNNLTGKPVKVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGSLG 257 A++PVNPKPFLNNLTGKPV VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTG+LG Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61 Query: 258 EILIRCNNVLYLRGVPEDEDIEEA 329 EILIRCNNVLYLRGVPEDE+IE+A Sbjct: 62 EILIRCNNVLYLRGVPEDEEIEDA 85 >ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max] Length = 88 Score = 162 bits (411), Expect = 4e-38 Identities = 76/84 (90%), Positives = 83/84 (98%) Frame = +3 Query: 78 ASVPVNPKPFLNNLTGKPVKVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGSLG 257 A++PVNPKPFLNNLTGKPV VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTG+LG Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61 Query: 258 EILIRCNNVLYLRGVPEDEDIEEA 329 EILIRCNNVLYLRGVPEDE+IE+A Sbjct: 62 EILIRCNNVLYLRGVPEDEEIEDA 85 >gb|ACU13643.1| unknown [Glycine max] Length = 88 Score = 162 bits (411), Expect = 4e-38 Identities = 76/84 (90%), Positives = 83/84 (98%) Frame = +3 Query: 78 ASVPVNPKPFLNNLTGKPVKVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGSLG 257 A++PVNPKPFLNNLTGKPV VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTG+LG Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61 Query: 258 EILIRCNNVLYLRGVPEDEDIEEA 329 EILIRCNNVLYLRGVPEDE+IE+A Sbjct: 62 EILIRCNNVLYLRGVPEDEEIEDA 85