BLASTX nr result

ID: Coptis24_contig00022918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022918
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38353.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_003635088.1| PREDICTED: uncharacterized protein LOC100853...   174   1e-41
emb|CAN83308.1| hypothetical protein VITISV_023019 [Vitis vinifera]   156   2e-36
ref|XP_002310772.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_002281100.1| PREDICTED: uncharacterized protein LOC100255...   151   6e-35

>emb|CBI38353.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  175 bits (444), Expect = 4e-42
 Identities = 95/194 (48%), Positives = 122/194 (62%), Gaps = 5/194 (2%)
 Frame = +2

Query: 2   KDDYTPKKDYSVINSSQPMVTQNSCANPQKQKNAAVVKEVLLDSGIHRSHSALSYRSTYK 181
           + D T K++ S    S       S ANP+K+ N  + +E +LDS +HR HS+LS RS + 
Sbjct: 192 RPDITSKRENSAAYHSC-----QSHANPRKESNG-ISEEKILDSSVHRCHSSLSQRSAFP 245

Query: 182 TRTSPPVENLAKDLWSCHSQPLSYQEYVPSATSSVVSLAEHLGT-----LPEAPNRISED 346
           TRTSPP E+L K + +CHSQPLS  EY  + +S+V+SLAEHLGT     +PE PNRISED
Sbjct: 246 TRTSPPAESLTKAIRACHSQPLSMMEYAQNTSSNVISLAEHLGTRISDHVPETPNRISED 305

Query: 347 LIKCISAIYCRVCDXXXXXXXXXXXXXXXXXXXXXXXXQDHYNSWSPCRRKDSSFDAYLE 526
           +IKC+SAI+C++ D                        QDH + WSP  RKDSSFD  L+
Sbjct: 306 MIKCMSAIFCKLAD-PPLTHHGLSSPNSSLSSISAFSPQDHCDMWSPGFRKDSSFDVRLD 364

Query: 527 NPFHIEGLKEFSGP 568
           NPFH+EGLKEFSGP
Sbjct: 365 NPFHVEGLKEFSGP 378


>ref|XP_003635088.1| PREDICTED: uncharacterized protein LOC100853414 [Vitis vinifera]
          Length = 595

 Score =  174 bits (440), Expect = 1e-41
 Identities = 94/194 (48%), Positives = 121/194 (62%), Gaps = 5/194 (2%)
 Frame = +2

Query: 2   KDDYTPKKDYSVINSSQPMVTQNSCANPQKQKNAAVVKEVLLDSGIHRSHSALSYRSTYK 181
           + D T K++ S    S       S  NP+K+ N  + +E +LDS +HR HS+LS RS + 
Sbjct: 156 RPDITSKRENSAAYHSC-----QSHVNPRKESNG-ISEEKILDSSVHRCHSSLSQRSAFP 209

Query: 182 TRTSPPVENLAKDLWSCHSQPLSYQEYVPSATSSVVSLAEHLGT-----LPEAPNRISED 346
           TRTSPP E+L K + +CHSQPLS  EY  + +S+V+SLAEHLGT     +PE PNRISED
Sbjct: 210 TRTSPPAESLTKAIRACHSQPLSMMEYAQNTSSNVISLAEHLGTRISDHVPETPNRISED 269

Query: 347 LIKCISAIYCRVCDXXXXXXXXXXXXXXXXXXXXXXXXQDHYNSWSPCRRKDSSFDAYLE 526
           +IKC+SAI+C++ D                        QDH + WSP  RKDSSFD  L+
Sbjct: 270 MIKCMSAIFCKLAD-PPLTHHGLSSPNSSLSSISAFSPQDHCDMWSPGFRKDSSFDVRLD 328

Query: 527 NPFHIEGLKEFSGP 568
           NPFH+EGLKEFSGP
Sbjct: 329 NPFHVEGLKEFSGP 342


>emb|CAN83308.1| hypothetical protein VITISV_023019 [Vitis vinifera]
          Length = 719

 Score =  156 bits (395), Expect = 2e-36
 Identities = 94/228 (41%), Positives = 121/228 (53%), Gaps = 39/228 (17%)
 Frame = +2

Query: 2   KDDYTPKKDYSVINSSQPMVTQNSCANPQKQKNAAVVKEVLLDSGIHRSHSALSYRSTYK 181
           + D T K++ S    S       S  NP+K+ N  + +E +LDS +HR HS+LS RS + 
Sbjct: 246 RPDITSKRENSAAYHSC-----QSHVNPRKESNG-ISEEKILDSSVHRCHSSLSQRSAFP 299

Query: 182 TRTSPPVENLAKDLWSCHSQPLSYQE---------------------------------- 259
           TRTSPP E+L K + +CHSQPLS  E                                  
Sbjct: 300 TRTSPPAESLTKAIRACHSQPLSMMEPTSCYNDHRKNAGDGKLYFGCMVILYCNPVTSVQ 359

Query: 260 YVPSATSSVVSLAEHLGT-----LPEAPNRISEDLIKCISAIYCRVCDXXXXXXXXXXXX 424
           Y  + +S+V+SLAEHLGT     +PE PNRISED+IKC+SAI+C++ D            
Sbjct: 360 YAQNTSSNVISLAEHLGTRISDHVPETPNRISEDMIKCMSAIFCKLADPPLTHHGLSSPN 419

Query: 425 XXXXXXXXXXXXQDHYNSWSPCRRKDSSFDAYLENPFHIEGLKEFSGP 568
                       QDH + WSP  RKDSSFD  L+NPFH+EGLKEFSGP
Sbjct: 420 SSLSSISAFSP-QDHCDMWSPGFRKDSSFDVRLDNPFHVEGLKEFSGP 466


>ref|XP_002310772.1| predicted protein [Populus trichocarpa] gi|222853675|gb|EEE91222.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  152 bits (384), Expect = 4e-35
 Identities = 85/184 (46%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
 Frame = +2

Query: 41  NSSQPMVTQNSCA---NPQKQKNAAVVKEVLLDSGIHRSHSALSYRSTYKTRTSPPVENL 211
           +  +   TQ +C    N  K+ N    +E LLDSG+HR HS+LS RS +  RTSPP E L
Sbjct: 133 SKKETSATQTACQSRDNKWKETNVIGGEEKLLDSGVHRCHSSLSQRSAFSNRTSPPEEFL 192

Query: 212 AKDLWSCHSQPLSYQEYVPSATSSVVSLAEHLGT-----LPEAPNRISEDLIKCISAIYC 376
            + + +CHSQPLS  EY  SA S+V+SLAEHLGT     +PE PN++SED+IKC+SAIYC
Sbjct: 193 GRAVRACHSQPLSMMEYAQSA-SNVISLAEHLGTSIYDHVPETPNKLSEDMIKCMSAIYC 251

Query: 377 RVCDXXXXXXXXXXXXXXXXXXXXXXXXQDHYNSWSPCRRKDSSFDAYLENPFHIEGLKE 556
           ++ D                        ++  + WSP  R +SSFD  L+NPF +EGLKE
Sbjct: 252 KLSD-PPLTHNGLSSPNSSLSSMSAFSPREQCDMWSPGFRNNSSFDVRLDNPFLVEGLKE 310

Query: 557 FSGP 568
           FSGP
Sbjct: 311 FSGP 314


>ref|XP_002281100.1| PREDICTED: uncharacterized protein LOC100255635 [Vitis vinifera]
          Length = 625

 Score =  151 bits (382), Expect = 6e-35
 Identities = 89/193 (46%), Positives = 112/193 (58%), Gaps = 5/193 (2%)
 Frame = +2

Query: 5   DDYTPKKDYSVINSSQPMVTQNSCANPQKQKNAAVVKEVLLDSGIHRSHSALSYRSTYKT 184
           D    K + SVI+SS  +  ++S  NP K+ N       LLDS IHRSHS+LS RST   
Sbjct: 180 DKIISKTENSVIHSSHLLSPRDSIDNPPKECNDIWGPHKLLDSSIHRSHSSLSQRSTCPI 239

Query: 185 RTSPPVENLAKDLWSCHSQPLSYQEYVPSATSSVVSLAEHLGTL-----PEAPNRISEDL 349
           RTSP ++ LAK + S HS PLS  E   +A S+ +SLAEHLGT      P  PNR+SE++
Sbjct: 240 RTSPSMQTLAKAVDSYHSLPLSMLERADNAPSNAISLAEHLGTNICDHDPMTPNRLSEEM 299

Query: 350 IKCISAIYCRVCDXXXXXXXXXXXXXXXXXXXXXXXXQDHYNSWSPCRRKDSSFDAYLEN 529
           IKCISAIYCR+ D                        +   + WSP  RK+SSF++ L+N
Sbjct: 300 IKCISAIYCRLADPPLSNNDYPSSPISSPLSMNEFSPRGQCDMWSPQCRKNSSFNSVLDN 359

Query: 530 PFHIEGLKEFSGP 568
           PFHIE  KEFSGP
Sbjct: 360 PFHIEESKEFSGP 372


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