BLASTX nr result

ID: Coptis24_contig00022914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022914
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329992.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29
ref|XP_004163770.1| PREDICTED: LOW QUALITY PROTEIN: G patch doma...   135   2e-29
ref|XP_004135573.1| PREDICTED: G patch domain-containing protein...   135   2e-29
ref|XP_002512582.1| nucleic acid binding protein, putative [Rici...   134   4e-29
ref|XP_003554597.1| PREDICTED: G patch domain-containing protein...   132   1e-28

>ref|XP_002329992.1| predicted protein [Populus trichocarpa] gi|222871417|gb|EEF08548.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  135 bits (341), Expect = 2e-29
 Identities = 65/88 (73%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   VIAEREQKIQSEVKEIRKVFYCDLCNKQYKLAMEFEVHLSSYDHNHRKRFKEMRDMHGSS 182
           V+AEREQKIQ+EVKEIRKVF+CDLCNKQYKLAMEFE HLSSYDHNHRKRFKEMR+MHG+S
Sbjct: 115 VLAEREQKIQTEVKEIRKVFFCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGTS 174

Query: 183 NXXXXXXXXXXXXXXXMAKFAQIADAHK 266
           +               MAKFAQ+ADAHK
Sbjct: 175 SRDDRRKRELQRQEREMAKFAQMADAHK 202


>ref|XP_004163770.1| PREDICTED: LOW QUALITY PROTEIN: G patch domain-containing protein
           8-like [Cucumis sativus]
          Length = 299

 Score =  135 bits (340), Expect = 2e-29
 Identities = 66/88 (75%), Positives = 71/88 (80%)
 Frame = +3

Query: 3   VIAEREQKIQSEVKEIRKVFYCDLCNKQYKLAMEFEVHLSSYDHNHRKRFKEMRDMHGSS 182
           V+AERE+KIQ+EVKEIRKVFYCDLCNKQYKLAMEFE HLSSYDHNHRKRFKEMR+MHGSS
Sbjct: 138 VLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSS 197

Query: 183 NXXXXXXXXXXXXXXXMAKFAQIADAHK 266
           +               MAKFAQIADA K
Sbjct: 198 SRDDRNKREQQREEREMAKFAQIADARK 225



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 35/47 (74%), Positives = 39/47 (82%)
 Frame = +1

Query: 406 DPEQRTTLKFGFSSKAGTSKNLFGGAAKKTKVPVRVSSVFGNDSDEE 546
           D +QR TLKFGFSSK GTSKN+FGGA KK KV   V+SVFGNDSD+E
Sbjct: 254 DQDQRKTLKFGFSSKGGTSKNIFGGAKKKPKV-APVASVFGNDSDDE 299


>ref|XP_004135573.1| PREDICTED: G patch domain-containing protein 8-like [Cucumis
           sativus]
          Length = 299

 Score =  135 bits (340), Expect = 2e-29
 Identities = 66/88 (75%), Positives = 71/88 (80%)
 Frame = +3

Query: 3   VIAEREQKIQSEVKEIRKVFYCDLCNKQYKLAMEFEVHLSSYDHNHRKRFKEMRDMHGSS 182
           V+AERE+KIQ+EVKEIRKVFYCDLCNKQYKLAMEFE HLSSYDHNHRKRFKEMR+MHGSS
Sbjct: 138 VLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSS 197

Query: 183 NXXXXXXXXXXXXXXXMAKFAQIADAHK 266
           +               MAKFAQIADA K
Sbjct: 198 SRDDRNKREQQREEREMAKFAQIADARK 225



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 35/47 (74%), Positives = 39/47 (82%)
 Frame = +1

Query: 406 DPEQRTTLKFGFSSKAGTSKNLFGGAAKKTKVPVRVSSVFGNDSDEE 546
           D +QR TLKFGFSSK GTSKN+FGGA KK KV   V+SVFGNDSD+E
Sbjct: 254 DQDQRKTLKFGFSSKGGTSKNIFGGAKKKPKV-APVASVFGNDSDDE 299


>ref|XP_002512582.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548543|gb|EEF50034.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score =  134 bits (338), Expect = 4e-29
 Identities = 65/88 (73%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   VIAEREQKIQSEVKEIRKVFYCDLCNKQYKLAMEFEVHLSSYDHNHRKRFKEMRDMHGSS 182
           V+AEREQKIQ+EVKEIRKVFYCDLCNKQYKLAMEFEVHLSSYDHNHRKRFKEMR+MHG+S
Sbjct: 139 VLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEVHLSSYDHNHRKRFKEMREMHGTS 198

Query: 183 NXXXXXXXXXXXXXXXMAKFAQIADAHK 266
           +               MA+FAQ+ADA K
Sbjct: 199 SRDDRQKREQQRQEREMARFAQMADARK 226


>ref|XP_003554597.1| PREDICTED: G patch domain-containing protein 8-like [Glycine max]
          Length = 304

 Score =  132 bits (333), Expect = 1e-28
 Identities = 64/88 (72%), Positives = 70/88 (79%)
 Frame = +3

Query: 3   VIAEREQKIQSEVKEIRKVFYCDLCNKQYKLAMEFEVHLSSYDHNHRKRFKEMRDMHGSS 182
           V+AEREQKIQ+EVKEIRKVFYCDLCNKQYKLAMEFE HLSSYDHNHRKRFK+M++MHG S
Sbjct: 142 VLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGS 201

Query: 183 NXXXXXXXXXXXXXXXMAKFAQIADAHK 266
           +               MAKFAQIADA K
Sbjct: 202 SRDDRQKREQLRQEREMAKFAQIADAQK 229


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