BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022913
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                39   1e-05

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 38.9 bits (89), Expect(2) = 1e-05
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1

Query: 13   SVFHERTKHIEIDCHIS 63
            SVFHERTKHIEIDCH++
Sbjct: 1318 SVFHERTKHIEIDCHLT 1334



 Score = 35.0 bits (79), Expect(2) = 1e-05
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 57   YLMCHHFQSGTLTLPFLSSSLQLTDF 134
            +L  HH + GT+ LPF+ SSLQ+ DF
Sbjct: 1332 HLTRHHLKHGTIALPFVPSSLQIADF 1357