BLASTX nr result

ID: Coptis24_contig00022897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022897
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...    77   1e-12
ref|XP_003575303.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...    77   1e-12
dbj|BAJ88574.1| predicted protein [Hordeum vulgare subsp. vulgare]     75   4e-12
ref|NP_001047358.2| Os02g0602500 [Oryza sativa Japonica Group] g...    75   5e-12
dbj|BAD19345.1| 2 coiled coil domains of eukaryotic origin (31.3...    75   5e-12

>ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Cucumis sativus]
           gi|449491085|ref|XP_004158794.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 1 [Cucumis
           sativus] gi|449491087|ref|XP_004158795.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Cucumis
           sativus]
          Length = 303

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = -3

Query: 376 HVPLPDEREIEKMVLAKKKQELLSKYTSDTLMVEQSEAKAMLNIQR 239
           HVPLPDE+EIEKMVL KKK ELLSKY SD L+ EQSEAK+MLNIQR
Sbjct: 258 HVPLPDEKEIEKMVLEKKKMELLSKYASDMLLEEQSEAKSMLNIQR 303


>ref|XP_003575303.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog isoform 1
           [Brachypodium distachyon]
           gi|357149997|ref|XP_003575304.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2
           [Brachypodium distachyon]
          Length = 311

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = -3

Query: 376 HVPLPDEREIEKMVLAKKKQELLSKYTSDTLMVEQSEAKAMLNIQR 239
           HVPLPDE+EIE+MVL KKK+ELLSKYTSDTL  EQ EAK MLN+QR
Sbjct: 266 HVPLPDEKEIERMVLEKKKKELLSKYTSDTLQDEQKEAKEMLNVQR 311


>dbj|BAJ88574.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 311

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = -3

Query: 376 HVPLPDEREIEKMVLAKKKQELLSKYTSDTLMVEQSEAKAMLNIQR 239
           HVPLPDE+EIE+MVL KKK+ELLSKYTSD L  EQ EAK MLN+QR
Sbjct: 266 HVPLPDEKEIERMVLEKKKKELLSKYTSDALQSEQKEAKEMLNVQR 311


>ref|NP_001047358.2| Os02g0602500 [Oryza sativa Japonica Group]
           gi|47497304|dbj|BAD19346.1| 2 coiled coil domains of
           eukaryotic origin (31.3 kD)-like protein [Oryza sativa
           Japonica Group] gi|47848308|dbj|BAD22172.1| 2 coiled
           coil domains of eukaryotic origin (31.3 kD)-like protein
           [Oryza sativa Japonica Group]
           gi|255671068|dbj|BAF09272.2| Os02g0602500 [Oryza sativa
           Japonica Group]
          Length = 203

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = -3

Query: 376 HVPLPDEREIEKMVLAKKKQELLSKYTSDTLMVEQSEAKAMLNIQR 239
           HVPLPDE+EIE+MVL +KK+ELLSKYTSD L VEQ EAK MLN++R
Sbjct: 158 HVPLPDEKEIERMVLERKKKELLSKYTSDALQVEQEEAKEMLNVRR 203


>dbj|BAD19345.1| 2 coiled coil domains of eukaryotic origin (31.3 kD)-like protein
           [Oryza sativa Japonica Group]
           gi|47848307|dbj|BAD22171.1| 2 coiled coil domains of
           eukaryotic origin (31.3 kD)-like protein [Oryza sativa
           Japonica Group] gi|125540189|gb|EAY86584.1| hypothetical
           protein OsI_07964 [Oryza sativa Indica Group]
           gi|125582786|gb|EAZ23717.1| hypothetical protein
           OsJ_07419 [Oryza sativa Japonica Group]
           gi|215693876|dbj|BAG89075.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 311

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = -3

Query: 376 HVPLPDEREIEKMVLAKKKQELLSKYTSDTLMVEQSEAKAMLNIQR 239
           HVPLPDE+EIE+MVL +KK+ELLSKYTSD L VEQ EAK MLN++R
Sbjct: 266 HVPLPDEKEIERMVLERKKKELLSKYTSDALQVEQEEAKEMLNVRR 311


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