BLASTX nr result
ID: Coptis24_contig00022881
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022881 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat... 231 4e-59 ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat... 229 2e-58 ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat... 227 7e-58 ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2... 226 2e-57 ref|XP_002514567.1| pentatricopeptide repeat-containing protein,... 224 7e-57 >ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera] Length = 743 Score = 231 bits (590), Expect = 4e-59 Identities = 112/137 (81%), Positives = 126/137 (91%) Frame = -3 Query: 412 LALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLL 233 LAL GKQIHAY+IRTD+KDN+FVGSALVDMYSKC SI+ AE VFK+M KN++SWT++L Sbjct: 284 LALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAML 343 Query: 232 VGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLI 53 VGYGQNG SEEA++IF EMQRNGVEPD+FTLGSVISSCANLASLEEGAQFH +ALV GLI Sbjct: 344 VGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI 403 Query: 52 SFITVSNALVTLYGKCG 2 SFITVSNAL+TLYGKCG Sbjct: 404 SFITVSNALITLYGKCG 420 Score = 97.4 bits (241), Expect = 1e-18 Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 31/162 (19%) Frame = -3 Query: 397 GKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIV----------- 251 G+QI+ I++ + ++FVGS LVDMY+K G I A++ F +M +N+V Sbjct: 157 GRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMR 216 Query: 250 --------------------SWTSLLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSV 131 SWT ++ G QNGL EA+ +F EM+ G D+FT GSV Sbjct: 217 CGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSV 276 Query: 130 ISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKC 5 +++C +L +L EG Q H+ + + V +ALV +Y KC Sbjct: 277 LTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKC 318 Score = 85.1 bits (209), Expect = 5e-15 Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Frame = -3 Query: 409 ALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLV 230 +L G Q H + + I V +AL+ +Y KCGS ++ ++F +M ++ VSWT+LL Sbjct: 386 SLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLA 445 Query: 229 GYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQ-FHSQALVFGLI 53 GY Q G + E + +F M +G++PD T V+S+C+ +E+G Q F S G++ Sbjct: 446 GYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIM 505 Query: 52 SFITVSNALVTLYGKCG 2 + ++ L G+ G Sbjct: 506 PIVDHCTCIIDLLGRAG 522 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Frame = -3 Query: 352 NIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLVGYGQNGLSEEAMRIFCEMQ 173 N+F + ++ +YSK G + +++F M ++ VSW + GY G +A+R++ M Sbjct: 70 NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129 Query: 172 RN-GVEPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKCG 2 ++ + + T +++ C+ ++ G Q + Q L FG S + V + LV +Y K G Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187 >ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Glycine max] Length = 747 Score = 229 bits (584), Expect = 2e-58 Identities = 110/137 (80%), Positives = 126/137 (91%) Frame = -3 Query: 412 LALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLL 233 +AL+ GKQ+HAYIIRTDY+DNIFVGSALVDMY KC SI+ AE VF++M KN+VSWT++L Sbjct: 288 MALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAML 347 Query: 232 VGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLI 53 VGYGQNG SEEA++IFC+MQ NG+EPD+FTLGSVISSCANLASLEEGAQFH +ALV GLI Sbjct: 348 VGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI 407 Query: 52 SFITVSNALVTLYGKCG 2 SFITVSNALVTLYGKCG Sbjct: 408 SFITVSNALVTLYGKCG 424 Score = 102 bits (254), Expect = 3e-20 Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 31/162 (19%) Frame = -3 Query: 397 GKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIV----------- 251 G Q+H ++++ ++ +FVGS LVDMYSK G + A + F +M KN+V Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMR 220 Query: 250 --------------------SWTSLLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSV 131 SWT+++ G+ QNGL EA+ +F EM+ +E D++T GSV Sbjct: 221 CSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSV 280 Query: 130 ISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKC 5 +++C + +L+EG Q H+ + I V +ALV +Y KC Sbjct: 281 LTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKC 322 Score = 82.4 bits (202), Expect = 3e-14 Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 1/137 (0%) Frame = -3 Query: 409 ALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLV 230 +L G Q H + + I V +ALV +Y KCGSI + ++F +M + + VSWT+L+ Sbjct: 390 SLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVS 449 Query: 229 GYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQ-FHSQALVFGLI 53 GY Q G + E +R+F M +G +PD+ T V+S+C+ +++G Q F S +I Sbjct: 450 GYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRII 509 Query: 52 SFITVSNALVTLYGKCG 2 ++ L+ + G Sbjct: 510 PIEDHYTCMIDLFSRAG 526 Score = 59.3 bits (142), Expect = 3e-07 Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 32/166 (19%) Frame = -3 Query: 403 RHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLVGY 224 R K+IH +II+ IF+ + LV Y+K I +A +VF QM +N+ SW +LL Y Sbjct: 26 RDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSY 85 Query: 223 GQNGLSEEAMRIFCEMQ-RNGVEPDE---------FTLGSV------------------I 128 + E R+F M R+ V + F L SV + Sbjct: 86 SKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIAL 145 Query: 127 SSCANLASLEE----GAQFHSQALVFGLISFITVSNALVTLYGKCG 2 S+ LAS + G Q H + FG S++ V + LV +Y K G Sbjct: 146 STMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTG 191 >ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] Length = 743 Score = 227 bits (579), Expect = 7e-58 Identities = 106/137 (77%), Positives = 124/137 (90%) Frame = -3 Query: 412 LALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLL 233 LAL GKQIHAYIIRTDY+DNIFVGSAL+DMY KC ++++AE VF++M HKN++SWT++L Sbjct: 284 LALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAML 343 Query: 232 VGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLI 53 VGYGQNG SEEA+RIFC+MQRN + PD+FTLGSVISSCANLASLEEGAQFH QAL GLI Sbjct: 344 VGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLI 403 Query: 52 SFITVSNALVTLYGKCG 2 F+TVSNAL+TLYGKCG Sbjct: 404 CFVTVSNALITLYGKCG 420 Score = 98.6 bits (244), Expect = 5e-19 Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 31/162 (19%) Frame = -3 Query: 397 GKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIV----------- 251 G+QIH I + Y+ +FVGS LVDMY+K G I A ++F+++ KNIV Sbjct: 157 GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLR 216 Query: 250 --------------------SWTSLLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSV 131 SWT+++ G QNGL +EA+ F EM G D+FT GSV Sbjct: 217 CRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSV 276 Query: 130 ISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKC 5 +++C +L+EG Q H+ + I V +AL+ +Y KC Sbjct: 277 LTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKC 318 Score = 80.1 bits (196), Expect = 2e-13 Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 1/118 (0%) Frame = -3 Query: 352 NIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLVGYGQNGLSEEAMRIFCEMQ 173 N+F + L+ YSK G ++ ++VF M + ++VSW SLL GY NGL E++R++ M Sbjct: 70 NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMML 129 Query: 172 RNG-VEPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKCG 2 ++G V + T +++ +N ++ G Q H Q FG S++ V + LV +Y K G Sbjct: 130 KDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187 Score = 79.3 bits (194), Expect = 3e-13 Identities = 37/109 (33%), Positives = 63/109 (57%) Frame = -3 Query: 409 ALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLV 230 +L G Q H + + + V +AL+ +Y KCGS+ HA ++F +M ++ VSWT+L+ Sbjct: 386 SLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVS 445 Query: 229 GYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQF 83 GY Q G + E + +F M +G+ PD T V+S+C+ +E+G + Sbjct: 446 GYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHY 494 >ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa] Length = 743 Score = 226 bits (575), Expect = 2e-57 Identities = 106/136 (77%), Positives = 123/136 (90%) Frame = -3 Query: 409 ALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLV 230 AL+ GK+IH IIR+ Y N+FVGSALVDMY KC S+R+AE VFK+M +KN+VSWT++LV Sbjct: 285 ALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLV 344 Query: 229 GYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLIS 50 GYGQNG SEEA+R+FC+MQRNG+EPD+FTLGSVISSCANLASLEEGAQFH QALV GLIS Sbjct: 345 GYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLIS 404 Query: 49 FITVSNALVTLYGKCG 2 FITVSNAL+TLYGKCG Sbjct: 405 FITVSNALITLYGKCG 420 Score = 101 bits (251), Expect = 7e-20 Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 31/162 (19%) Frame = -3 Query: 397 GKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIV----------- 251 G+QIH I++ + +FVGS+LVDMY+K G + A +VF ++ +N+V Sbjct: 157 GRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLR 216 Query: 250 --------------------SWTSLLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSV 131 SWT+++ G QNGL EAM +F +M++ G+ D++T GSV Sbjct: 217 SGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSV 276 Query: 130 ISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKC 5 +++C L +L+EG + H+ + G + V +ALV +Y KC Sbjct: 277 LTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKC 318 Score = 87.0 bits (214), Expect = 1e-15 Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Frame = -3 Query: 409 ALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLV 230 +L G Q H + + I V +AL+ +Y KCGSI + ++F +M ++ VSWT+L+ Sbjct: 386 SLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVS 445 Query: 229 GYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQ-FHSQALVFGLI 53 GY Q G + E + +F M G++PD T +V+S+C+ +E G Q F S G+I Sbjct: 446 GYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGII 505 Query: 52 SFITVSNALVTLYGKCG 2 F ++ L+G+ G Sbjct: 506 PFSDHYTCMIDLFGRAG 522 Score = 64.7 bits (156), Expect = 7e-09 Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = -3 Query: 352 NIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLVGYGQNGLSEEAMRIFCEMQ 173 N F + ++ YSK G + +++F M +++ VSW SL+ GY G EA++ + M Sbjct: 70 NSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMM 129 Query: 172 RNGV-EPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKCG 2 ++GV + T +++ ++ ++ G Q H Q + FG +++ V ++LV +Y K G Sbjct: 130 KDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMG 187 >ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223546171|gb|EEF47673.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 515 Score = 224 bits (570), Expect = 7e-57 Identities = 106/136 (77%), Positives = 124/136 (91%) Frame = -3 Query: 409 ALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLV 230 ALR GKQ+HA+IIR+D DN+FVGSALVDMY KC +R+AE VFK+M +KN+VSWT++LV Sbjct: 288 ALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRYAEAVFKRMKYKNVVSWTAILV 347 Query: 229 GYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLIS 50 GYGQNG SEEA+++FC+MQRNG+EPD+FTLGSVISSCANLASLEEGAQFH +ALV GLIS Sbjct: 348 GYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLIS 407 Query: 49 FITVSNALVTLYGKCG 2 ITVSNALVTLYGKCG Sbjct: 408 SITVSNALVTLYGKCG 423 Score = 103 bits (258), Expect = 1e-20 Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 31/162 (19%) Frame = -3 Query: 397 GKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIV----------- 251 G+QIH +I++ + +FVGS LVDMY+K G + A+KVF +M +N+V Sbjct: 160 GRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDRNVVMHNTMITGLLK 219 Query: 250 --------------------SWTSLLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSV 131 SWT+++ G QNGL EEA+ F +M+ +G+ D++T GSV Sbjct: 220 FGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSV 279 Query: 130 ISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKC 5 +++C L +L EG Q H+ + + V +ALV +Y KC Sbjct: 280 LTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKC 321 Score = 80.9 bits (198), Expect = 1e-13 Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Frame = -3 Query: 409 ALRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLV 230 +L G Q H + + +I V +ALV +Y KCGSI ++++F +M ++ VSWT+L+ Sbjct: 389 SLEEGAQFHCRALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALIS 448 Query: 229 GYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQAL-VFGLI 53 GY Q G + E + +F M +G++PD T V+ +C+ + G QF L +G+I Sbjct: 449 GYAQFGKARETIELFERMLAHGLKPDAVTFIGVLLACSRAGLVARGQQFFDSMLEEYGII 508 Score = 63.2 bits (152), Expect = 2e-08 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Frame = -3 Query: 352 NIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLVGYGQNGLSEEAMRIFCEMQ 173 N F + ++ YSK G + +++F M +++ VSW ++L GY G +A++ + M Sbjct: 73 NSFSWNTILSAYSKSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMM 132 Query: 172 RNGV-EPDEFTLGSVISSCANLASLEEGAQFHSQALVFGLISFITVSNALVTLYGKCG 2 R+GV + T +++ ++ ++ G Q H + FG ++ V + LV +Y K G Sbjct: 133 RDGVFNLNRITFSTMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTG 190