BLASTX nr result
ID: Coptis24_contig00022872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022872 (378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2... 167 8e-40 ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like... 161 6e-38 emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera] 161 6e-38 ref|XP_002529293.1| ring finger protein, putative [Ricinus commu... 144 6e-33 ref|XP_002532367.1| ring finger protein, putative [Ricinus commu... 144 7e-33 >ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1| predicted protein [Populus trichocarpa] Length = 340 Score = 167 bits (423), Expect = 8e-40 Identities = 79/123 (64%), Positives = 98/123 (79%) Frame = +2 Query: 8 SVCLNEFQDEEKLRVLPSCTHVFHIDCIDVWLQSNAHCPLCRSSISSRTRLPIDHIIAPS 187 +VCLNEFQ+ EKLR +P+C+HVFHIDCIDVWLQSNA+CPLCR+SISS TR PIDHIIAPS Sbjct: 119 AVCLNEFQEAEKLRRIPNCSHVFHIDCIDVWLQSNANCPLCRTSISSTTRFPIDHIIAPS 178 Query: 188 SSPQDVTPFTDTVITGDEDFVVIEVRGDTVADQTTHERYRHELPKSGELSSESVNPSPRK 367 S+P D P++++V+ GDED+VVIE+ DQT E SGELS+ S++PSPRK Sbjct: 179 STPHDANPYSESVMGGDEDYVVIELSNHNSTDQTL--LAAQERLNSGELSARSISPSPRK 236 Query: 368 LEQ 376 +EQ Sbjct: 237 IEQ 239 >ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera] Length = 359 Score = 161 bits (407), Expect = 6e-38 Identities = 77/123 (62%), Positives = 97/123 (78%) Frame = +2 Query: 8 SVCLNEFQDEEKLRVLPSCTHVFHIDCIDVWLQSNAHCPLCRSSISSRTRLPIDHIIAPS 187 +VCLNEFQ+EEKLR++P+C+H+FHIDCIDVWLQSNA+CPLCR+SIS+ R P+ IIAPS Sbjct: 139 AVCLNEFQEEEKLRIIPNCSHIFHIDCIDVWLQSNANCPLCRTSISTTPRFPVHQIIAPS 198 Query: 188 SSPQDVTPFTDTVITGDEDFVVIEVRGDTVADQTTHERYRHELPKSGELSSESVNPSPRK 367 SSPQD +P+ + I GDEDFVVIE+ D+ AD + E S ELS+ S++PSPRK Sbjct: 199 SSPQDPSPYANNYIGGDEDFVVIELGNDSSADSSLLR--PPERLNSRELSAPSISPSPRK 256 Query: 368 LEQ 376 LEQ Sbjct: 257 LEQ 259 >emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera] Length = 419 Score = 161 bits (407), Expect = 6e-38 Identities = 77/123 (62%), Positives = 97/123 (78%) Frame = +2 Query: 8 SVCLNEFQDEEKLRVLPSCTHVFHIDCIDVWLQSNAHCPLCRSSISSRTRLPIDHIIAPS 187 +VCLNEFQ+EEKLR++P+C+H+FHIDCIDVWLQSNA+CPLCR+SIS+ R P+ IIAPS Sbjct: 199 AVCLNEFQEEEKLRIIPNCSHIFHIDCIDVWLQSNANCPLCRTSISTTPRFPVHQIIAPS 258 Query: 188 SSPQDVTPFTDTVITGDEDFVVIEVRGDTVADQTTHERYRHELPKSGELSSESVNPSPRK 367 SSPQD +P+ + I GDEDFVVIE+ D+ AD + E S ELS+ S++PSPRK Sbjct: 259 SSPQDPSPYANNYIGGDEDFVVIELGNDSSADSSLLR--PPERLNSRELSAPSISPSPRK 316 Query: 368 LEQ 376 LEQ Sbjct: 317 LEQ 319 >ref|XP_002529293.1| ring finger protein, putative [Ricinus communis] gi|223531217|gb|EEF33062.1| ring finger protein, putative [Ricinus communis] Length = 376 Score = 144 bits (364), Expect = 6e-33 Identities = 78/136 (57%), Positives = 99/136 (72%), Gaps = 13/136 (9%) Frame = +2 Query: 8 SVCLNEFQDEEKLRVLPSCTHVFHIDCIDVWLQSNAHCPLCRSSISSRTR-LPIDHIIAP 184 +VCLNEFQ+ EKLR++P+C+HVFHIDCIDVWLQ+NA+CPLCR+SISS TR +P D IIAP Sbjct: 134 AVCLNEFQENEKLRIIPNCSHVFHIDCIDVWLQNNANCPLCRNSISSTTRSIPFDRIIAP 193 Query: 185 SSSPQDVTPFTDTVITGDEDFVVIEV---------RGDTVADQTTHERYRHELPKSGELS 337 SSSPQD P+++++I GDED+VVIE+ ADQT + L SGELS Sbjct: 194 SSSPQDPNPYSESLIGGDEDYVVIELGNINNNIINNSHNPADQTLLAA-QERLMNSGELS 252 Query: 338 -SESVNPSPR--KLEQ 376 + ++PS R KLEQ Sbjct: 253 IARPISPSSRRQKLEQ 268 >ref|XP_002532367.1| ring finger protein, putative [Ricinus communis] gi|223527923|gb|EEF30010.1| ring finger protein, putative [Ricinus communis] Length = 345 Score = 144 bits (363), Expect = 7e-33 Identities = 68/122 (55%), Positives = 87/122 (71%) Frame = +2 Query: 11 VCLNEFQDEEKLRVLPSCTHVFHIDCIDVWLQSNAHCPLCRSSISSRTRLPIDHIIAPSS 190 VCLNEFQ+E+ LRVLP+C H FH+DCID+WLQSNA+CPLCR+ IS TR PID IIAPSS Sbjct: 130 VCLNEFQEEDMLRVLPNCNHSFHLDCIDIWLQSNANCPLCRTGISGITRYPIDQIIAPSS 189 Query: 191 SPQDVTPFTDTVITGDEDFVVIEVRGDTVADQTTHERYRHELPKSGELSSESVNPSPRKL 370 SPQ P+TD+++ GDEDFVVIE+ G+ H + + + ++ S SP K+ Sbjct: 190 SPQGSQPYTDSLMGGDEDFVVIELGGEEEGILLPHRQQERDASRETQMQLRS--QSPAKM 247 Query: 371 EQ 376 EQ Sbjct: 248 EQ 249