BLASTX nr result
ID: Coptis24_contig00022870
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022870 (1014 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling co... 247 3e-63 ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling co... 243 4e-62 ref|NP_001241294.1| chromatin structure-remodeling complex prote... 236 5e-60 gb|ABF85669.1| SNF5 [Pisum sativum] 234 2e-59 ref|XP_003609906.1| Chromatin structure-remodeling complex prote... 234 3e-59 >ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling complex protein BSH-like [Cucumis sativus] gi|449498785|ref|XP_004160633.1| PREDICTED: chromatin structure-remodeling complex protein BSH-like [Cucumis sativus] Length = 240 Score = 247 bits (631), Expect = 3e-63 Identities = 116/162 (71%), Positives = 145/162 (89%), Gaps = 3/162 (1%) Frame = -1 Query: 1014 SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 835 SQ+TEFRS+EGQ+MY+G++I+P+KLDLRVNNT+++DQFLWDLNNYESDPEEF+RT C+DL Sbjct: 79 SQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDL 138 Query: 834 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGR---QHVSASKPGGSSLDLVK 664 I DPEVGPA+AVAIREQLYEI +Q+VASARE R++KKGR +HV SK GG+S+DLVK Sbjct: 139 GIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVK 198 Query: 663 LFGGKSSILRKRKEWEFFEPIVDLLSNEEAEALNVREERNAR 538 LFG +SS++RKRK+W+ +EPIVDLLSNEE +AL +EER AR Sbjct: 199 LFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240 >ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling complex protein BSH [Vitis vinifera] gi|297736833|emb|CBI26034.3| unnamed protein product [Vitis vinifera] Length = 243 Score = 243 bits (621), Expect = 4e-62 Identities = 114/162 (70%), Positives = 143/162 (88%), Gaps = 3/162 (1%) Frame = -1 Query: 1014 SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 835 SQ+ EFRS+EGQ+M +G++IVP+KLDLRVN+T+++DQFLWDLNN+ESDPEEFARTFC+DL Sbjct: 79 SQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFARTFCKDL 138 Query: 834 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGR---QHVSASKPGGSSLDLVK 664 + DPEVGPA+AVAIREQLYEI IQSV SARE R++KKGR +H+ ASK G++LDL+K Sbjct: 139 GVEDPEVGPAIAVAIREQLYEIAIQSVTSARETRISKKGRRGAEHIPASKASGTALDLMK 198 Query: 663 LFGGKSSILRKRKEWEFFEPIVDLLSNEEAEALNVREERNAR 538 LFG KSSI+RKR+EW+ +EPIVD+LSNEE + L RE+RNAR Sbjct: 199 LFGNKSSIIRKRREWDVYEPIVDILSNEEVDVLEAREDRNAR 240 >ref|NP_001241294.1| chromatin structure-remodeling complex protein BSH-like [Glycine max] gi|296932945|gb|ADH93593.1| SNF5-type chromatin-remodeling complex protein [Glycine max] gi|297179845|gb|ADI23919.1| SNF5 [Glycine max] Length = 240 Score = 236 bits (603), Expect = 5e-60 Identities = 114/162 (70%), Positives = 140/162 (86%), Gaps = 3/162 (1%) Frame = -1 Query: 1014 SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 835 SQ++EFRSYEGQ+MY+G++IVP+KLDLRVN+T+V+DQFLWDLNN+ESDPEEFAR FC+D Sbjct: 79 SQLSEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDLNNFESDPEEFARIFCKDT 138 Query: 834 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGR---QHVSASKPGGSSLDLVK 664 I DPEVGPA+A AIREQLYEI IQSV SARE R++KKGR ++ SK G +++DLVK Sbjct: 139 GIEDPEVGPAIAFAIREQLYEIAIQSVVSARESRMSKKGRRGAEYTPVSKGGAAAVDLVK 198 Query: 663 LFGGKSSILRKRKEWEFFEPIVDLLSNEEAEALNVREERNAR 538 LFG KSS++RKRKEW+ +EPIVDLLSNEE +AL +EERN R Sbjct: 199 LFGPKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 240 >gb|ABF85669.1| SNF5 [Pisum sativum] Length = 240 Score = 234 bits (598), Expect = 2e-59 Identities = 114/162 (70%), Positives = 138/162 (85%), Gaps = 3/162 (1%) Frame = -1 Query: 1014 SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 835 SQ+ EFRSYEGQ+MY+G++I+P+KLDLRVN+T+V+DQFLWDLNN++SDPEEFARTFCRD+ Sbjct: 79 SQLAEFRSYEGQDMYAGEKIIPIKLDLRVNHTLVKDQFLWDLNNFDSDPEEFARTFCRDM 138 Query: 834 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGRQ---HVSASKPGGSSLDLVK 664 I DPEVGPAVA AIREQLYEI IQSV SARE R++KKGR+ SK G ++DLVK Sbjct: 139 GIEDPEVGPAVAFAIREQLYEIAIQSVVSARESRLSKKGRRGADFTPVSKGGAVAVDLVK 198 Query: 663 LFGGKSSILRKRKEWEFFEPIVDLLSNEEAEALNVREERNAR 538 LFG KSS++RKRKEW+ +EPIVDLLSNEE + L +EERN R Sbjct: 199 LFGIKSSVVRKRKEWDVYEPIVDLLSNEEVDVLEAKEERNFR 240 >ref|XP_003609906.1| Chromatin structure-remodeling complex protein BSH [Medicago truncatula] gi|355510961|gb|AES92103.1| Chromatin structure-remodeling complex protein BSH [Medicago truncatula] Length = 240 Score = 234 bits (597), Expect = 3e-59 Identities = 113/162 (69%), Positives = 139/162 (85%), Gaps = 3/162 (1%) Frame = -1 Query: 1014 SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 835 SQ+ EFRSY+GQ+MY+G++IVP+KLDLRVN+T+V+DQFLWDLNN++SDPEEFARTFCRD+ Sbjct: 79 SQLAEFRSYDGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDLNNFDSDPEEFARTFCRDM 138 Query: 834 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGRQHVS---ASKPGGSSLDLVK 664 I DPEVGPA+A AIREQLYEIV+QSV SARE R++KKGR+ SK G ++DLVK Sbjct: 139 GIEDPEVGPAIAFAIREQLYEIVVQSVVSARESRLSKKGRRGADFFPVSKGGAVAVDLVK 198 Query: 663 LFGGKSSILRKRKEWEFFEPIVDLLSNEEAEALNVREERNAR 538 LFG KSS++RKRKEW+ +EPIVDLLSNEE + L +EERN R Sbjct: 199 LFGIKSSVVRKRKEWDVYEPIVDLLSNEEVDILEAKEERNFR 240