BLASTX nr result

ID: Coptis24_contig00022855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022855
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248...    85   5e-15
emb|CBI22898.3| unnamed protein product [Vitis vinifera]               67   2e-09

>ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248159 [Vitis vinifera]
          Length = 1756

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/119 (42%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
 Frame = +2

Query: 2    DNESSVSILKNQS-ESDISMQNMQHKTGRGVETSIDDCDDISKPLELPESHLNTGNRKKL 178
            ++ESS+     +S ESD S+QN Q K  +G E S+D+ +D+ K  E PES +N GNR++L
Sbjct: 930  ESESSLEDSNIESDESDGSLQNEQCKHSKGKEVSLDEFEDMDKQHEHPESCMNAGNRRRL 989

Query: 179  ILKLPIRDSSKFVALGKSGAQLGEQVSLQDSFEAPLETTVINRKHLSFQELASSSGGKN 355
            +LK PIRDS++ +   ++ A L     +  S +AP E + +NR HLS Q+L  SS   N
Sbjct: 990  VLKFPIRDSNRLLLAPENQADL-----VGSSSKAPQEASEVNRNHLSSQDLGYSSSDAN 1043


>emb|CBI22898.3| unnamed protein product [Vitis vinifera]
          Length = 1569

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2    DNESSVSILKNQS-ESDISMQNMQHKTGRGVETSIDDCDDISKPLELPESHLNTGNRKKL 178
            ++ESS+     +S ESD S+QN Q K  +G E S+D+ +D+ K  E PES +N GNR++L
Sbjct: 924  ESESSLEDSNIESDESDGSLQNEQCKHSKGKEVSLDEFEDMDKQHEHPESCMNAGNRRRL 983

Query: 179  ILKLPIRDSSKFVALGKSGAQLGEQVSLQDSFEAPLETT 295
            +LK PIRDS++ +   ++ A L     +  S +AP E +
Sbjct: 984  VLKFPIRDSNRLLLAPENQADL-----VGSSSKAPQEAS 1017


Top