BLASTX nr result

ID: Coptis24_contig00022848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022848
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529155.1| DNA binding protein, putative [Ricinus commu...    90   2e-16
ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257...    89   5e-16
ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257...    89   5e-16
emb|CBI27058.3| unnamed protein product [Vitis vinifera]               89   5e-16

>ref|XP_002529155.1| DNA binding protein, putative [Ricinus communis]
           gi|223531434|gb|EEF33268.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 393

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/56 (83%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
 Frame = -1

Query: 269 KEDKEG-LNRKTRRCWSPELHRRFL*ALQQLGRSHAATLKQIRELMKVVGLTNDEV 105
           KEDK+G   RK RRCWSPELHRRFL ALQQLG SHAAT KQIRELMKV GLTNDEV
Sbjct: 223 KEDKDGQAQRKQRRCWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEV 278


>ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|222864997|gb|EEF02128.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/56 (83%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
 Frame = -1

Query: 269 KEDKE-GLNRKTRRCWSPELHRRFL*ALQQLGRSHAATLKQIRELMKVVGLTNDEV 105
           KEDKE G  RK RRCWSPELHRRFL +LQQLG SHAAT KQIRELMKV GLTNDEV
Sbjct: 214 KEDKEKGNQRKQRRCWSPELHRRFLHSLQQLGGSHAATPKQIRELMKVDGLTNDEV 269


>ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257723 isoform 1 [Vitis
           vinifera]
          Length = 369

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/56 (82%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
 Frame = -1

Query: 269 KEDKEGLN-RKTRRCWSPELHRRFL*ALQQLGRSHAATLKQIRELMKVVGLTNDEV 105
           KE+KEG + RK RRCWSPELHRRFL ALQQLG SH AT KQIRELMKV GLTNDEV
Sbjct: 191 KEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEV 246


>ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257723 isoform 2 [Vitis
           vinifera]
          Length = 362

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/56 (82%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
 Frame = -1

Query: 269 KEDKEGLN-RKTRRCWSPELHRRFL*ALQQLGRSHAATLKQIRELMKVVGLTNDEV 105
           KE+KEG + RK RRCWSPELHRRFL ALQQLG SH AT KQIRELMKV GLTNDEV
Sbjct: 184 KEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEV 239


>emb|CBI27058.3| unnamed protein product [Vitis vinifera]
          Length = 356

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/56 (82%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
 Frame = -1

Query: 269 KEDKEGLN-RKTRRCWSPELHRRFL*ALQQLGRSHAATLKQIRELMKVVGLTNDEV 105
           KE+KEG + RK RRCWSPELHRRFL ALQQLG SH AT KQIRELMKV GLTNDEV
Sbjct: 178 KEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEV 233


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