BLASTX nr result

ID: Coptis24_contig00022842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022842
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]    62   6e-08
emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]    62   6e-08
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    60   1e-07
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    59   4e-07
ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212...    58   9e-07

>emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]
          Length = 987

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
 Frame = -3

Query: 301 SLLLQEERQREIRV----APLTQLESAALAVSRGTSVQDKYRPPPAQYKCDHCHRIGHTI 134
           SL++QEERQR + +    A    + S   A SR +S  +  R    +  C HC+ +GHT+
Sbjct: 220 SLVVQEERQRSLTISNSPAFTAPVSSRFQAASRASSPTNSSRSRKDRPLCTHCNILGHTV 279

Query: 133 DRCYKLHGFPP 101
           DRCYK+HG+PP
Sbjct: 280 DRCYKIHGYPP 290


>emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
          Length = 1240

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
 Frame = -3

Query: 301 SLLLQEERQREIRV----APLTQLESAALAVSRGTSVQDKYRPPPAQYKCDHCHRIGHTI 134
           SL++QEERQR + +    A    + S   A SR +S  +  R    +  C HC+ +GHT+
Sbjct: 220 SLVVQEERQRSLTISNSPAFTAPVSSRFQAASRASSPTNSSRSRKDRPLCTHCNILGHTV 279

Query: 133 DRCYKLHGFPP 101
           DRCYK+HG+PP
Sbjct: 280 DRCYKIHGYPP 290


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
 Frame = -3

Query: 361 LHGFPPKQAN-------SSISPAFTDA-SLLLQEERQREIRVAPLTQLESAALAVSRGTS 206
           LHG P   ++       S I P FT   S LL+   +    +   + ++ ++  VS+   
Sbjct: 197 LHGLPDDYSHVRDQILGSPIVPNFTSTCSTLLRVPGKHTTDIT--SYVDDSSALVSQHND 254

Query: 205 VQDKYRPPPAQYKCDHCHRIGHTIDRCYKLHGFPPKQA----NASISPAFTD 62
               ++P   ++KCDHC R+GH IDRCY LHG PPK       A + P+  D
Sbjct: 255 RTRPHKPGKGRHKCDHCGRLGHKIDRCYALHGRPPKSVAVAQTAPVQPSTVD 306


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
 Frame = -3

Query: 301 SLLLQEERQREIRV----APLTQLESAALAVSRGTSVQDKYRPPPAQYKCDHCHRIGHTI 134
           SL++QEERQR +      A    + S   A SR +S  +  R    +  C HC+ +GHT+
Sbjct: 206 SLVVQEERQRSLTTSNSPAFTAPVSSRFQAASRASSPTNSSRSRKDRPLCTHCNILGHTV 265

Query: 133 DRCYKLHGFPP 101
           D+CYK+HG+PP
Sbjct: 266 DQCYKIHGYPP 276


>ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
           gi|449449869|ref|XP_004142687.1| PREDICTED:
           uncharacterized protein LOC101213831 [Cucumis sativus]
          Length = 440

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -3

Query: 301 SLLLQEERQREIRVAPLTQLESAAL-AVSRGTSVQDKYRPPPAQYKCDHCHRIGHTIDRC 125
           SL++QEERQR I  +P   +ES AL A S      DK +    +  C +C   GHT D+C
Sbjct: 167 SLIIQEERQRSIGSSP--SIESIALMANSERRFSSDKSKKKDTRPICSNCGYKGHTADKC 224

Query: 124 YKLHGFPP 101
           YKLHG+PP
Sbjct: 225 YKLHGYPP 232


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