BLASTX nr result

ID: Coptis24_contig00022838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022838
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-11
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   1e-10
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    70   7e-10
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    69   1e-09
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    67   8e-09

>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 46/157 (29%), Positives = 72/157 (45%)
 Frame = -1

Query: 554 GNAKLNTDGSLSENGCRIGGIVRDSNGKVLLAYTRAGGCRSVLSQELKAILAGLQGCKAI 375
           G  KLNTDGS+      IGG+ RD  G  +  +        +   EL AI  GL     +
Sbjct: 173 GWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWRGLVLALNL 232

Query: 374 QQLKVEVASDSLRAVKIIRHQEIVPWHCANITAAIDQLIRQFVSVNVIHVHREANRVADH 195
               + V SDSL  V  I  Q+            I  L+++F    V H  RE NR AD+
Sbjct: 233 HIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWRETNRAADY 292

Query: 194 LALLAIDHELEYFVPPLTATLMSIVEEDRNRIIYLRK 84
           LA + ++ ++  +      +L +I+++D   ++Y R+
Sbjct: 293 LAKMVVERDVVLWPADFPTSLNNIIKDDAEGMVYCRR 329


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
 Frame = -1

Query: 545  KLNTDGSLSENG-CRIGGIVRDSNGKVLLAYTRAGGCR-SVLSQELKAILAGLQGCKAIQ 372
            K+N DGS  +NG    G ++R+SNG+VL+A  +A G   S+L  E   +L G++G  ++Q
Sbjct: 1233 KVNFDGSKLDNGQAAYGFVIRNSNGEVLMARAKALGVYPSILMAEAMGLLEGIKGAISLQ 1292

Query: 371  QL--KVEVASDSLRAVKIIRHQEIVPWHCANITAAIDQLIRQFVSVNVIHVHREANRVAD 198
                K+    D++  +  +      PW  ANI      L+  F  V   H +REANR+AD
Sbjct: 1293 NWSRKIIFEGDNIAVINAMSPSATGPWTIANIILDAGALLGHFQEVKFQHCYREANRLAD 1352

Query: 197  HLALLAIDH-ELEYFVPPLTATLMSIVEED 111
             +A     H E+  ++PP       ++ +D
Sbjct: 1353 FMAHKGHSHPEVLCWLPPYCIDFSLLIRKD 1382


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
 Frame = -1

Query: 554 GNAKLNTDGSLSENGCRIGGIVRDSNGKVLLAYTRAGGCRSVLSQELKAILAGLQGCKAI 375
           G  KLNTDGS+  N    GG++RD  G+ + A+        V   EL AI  GL     +
Sbjct: 314 GWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWRGLVLSLGL 373

Query: 374 QQLKVEVASDSLRAVKIIRHQEIVPWHCANITAAIDQLIRQFVSVNVIHVHREANRVADH 195
               + V SDS+  V+ +  +++ P         I +L+++F    + H  RE NR ADH
Sbjct: 374 GIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLKKFDKYQISHSWRETNRAADH 432

Query: 194 LA---LLAIDHELE-YFVPPLTATLMSIVEEDRNRIIYLRK 84
           LA   LLA D  L     PP   +L  I+E+D     Y R+
Sbjct: 433 LAKMDLLANDVVLSPVDFPP---SLSRIIEDDAKGTKYRRR 470


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
 Frame = -1

Query: 554 GNAKLNTDGSLSENGCRIGGIVRDSNGKVLLAYTRAGGCRSVLSQELKAILAGLQGCKAI 375
           G  KLNTDGS+       GG++RD+ G  + A+        +   EL AI  GL     +
Sbjct: 280 GWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGL 339

Query: 374 QQLKVEVASDSLRAVKIIRHQEIVPWHCANITAAIDQLIRQFVSVNVIHVHREANRVADH 195
               + V SDS+ AVK I   +            I  L+++F    V H  RE N+ AD+
Sbjct: 340 GIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADY 399

Query: 194 LALLAID-HELEYFVPPLTATLMSIVEEDRNRIIYLRK 84
           L+ + ++ +++  +      TL +I+++D    IY R+
Sbjct: 400 LSKMVLERNDVVLWPVHFPTTLQNIIKDDAQGRIYCRR 437


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
 Frame = -1

Query: 569 EEDKKGNAKLNTDGSLSENGCRIGGIVRDSNGKVLLAYTRAGGCRSVLSQELKAILAGLQ 390
           E+ + G  KLNTDGS+       GG+ RD NG  + AY        +   EL AI  GL 
Sbjct: 269 EKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLV 328

Query: 389 GCKAIQQLKVEVASDSLRAVKIIRHQEIVPWHCANITAAIDQLIRQFVSVNVIHVHREAN 210
               +    + V SDS+ AVK I  ++       +    I  L+ +F    V H  RE N
Sbjct: 329 LASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETN 388

Query: 209 RVADHLALLAID-HELEYFVPPLTATLMSIVEEDRNRIIYLR 87
           + AD L+ + +  +++          L SI+++D    +Y R
Sbjct: 389 KAADFLSKMDLSGNDVVLGTADFPNGLNSIIKDDAEGRMYRR 430


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