BLASTX nr result

ID: Coptis24_contig00022830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022830
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522105.1| conserved hypothetical protein [Ricinus comm...   170   5e-40
ref|XP_002298793.1| predicted protein [Populus trichocarpa] gi|2...   164   4e-38
ref|XP_002276036.1| PREDICTED: uncharacterized protein LOC100251...   159   7e-37
ref|XP_002867158.1| hypothetical protein ARALYDRAFT_491300 [Arab...   156   6e-36
ref|XP_004159921.1| PREDICTED: uncharacterized LOC101213497 [Cuc...   156   8e-36

>ref|XP_002522105.1| conserved hypothetical protein [Ricinus communis]
           gi|223538704|gb|EEF40305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  170 bits (430), Expect = 5e-40
 Identities = 90/153 (58%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
 Frame = +2

Query: 170 TRDAGIITDPRNWSSARFTNLVNXXXXXXXXXXXXXXXXXXXXRSLDLLVRFIQNMFRKI 349
           T  + +I DPRNW  +  T+ +                     RSLDL VRFIQN+F+K+
Sbjct: 52  TNTSNLINDPRNWGRSINTSEL----FDDGNDDDEEEEEEEEDRSLDLFVRFIQNVFKKV 107

Query: 350 SKRARKAVRSVLPVSISNKLVGFSVNGVIILAFLWILKAFLEVVCTFGSLVFVSILLIRG 529
           SKRARKA RSVLP+SIS KLVGFSVNGV+ILAFLW+LKAFLEVVCT GS+VFVSILLIRG
Sbjct: 108 SKRARKAARSVLPLSISTKLVGFSVNGVLILAFLWVLKAFLEVVCTLGSVVFVSILLIRG 167

Query: 530 TWSAISYLQDTRHRNSN-IDGENSAWTGAQPAS 625
            WS I+YLQ++R+   N ++ E+  WTGAQPA+
Sbjct: 168 IWSGITYLQESRYLELNEVEDEHHEWTGAQPAT 200


>ref|XP_002298793.1| predicted protein [Populus trichocarpa] gi|222846051|gb|EEE83598.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  164 bits (414), Expect = 4e-38
 Identities = 86/144 (59%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = +2

Query: 197 PRNWSSARFTNLVNXXXXXXXXXXXXXXXXXXXXRSLDLLVRFIQNMFRKISKRARKAVR 376
           PRNWS +     +N                    RSLDLLVRFI N+F+K+SKRARKAVR
Sbjct: 3   PRNWSRS-----INSDFADDHEDGGDDDEAEEEDRSLDLLVRFISNVFKKVSKRARKAVR 57

Query: 377 SVLPVSISNKLVGFSVNGVIILAFLWILKAFLEVVCTFGSLVFVSILLIRGTWSAISYLQ 556
           SVLPV IS KLV FSVNGV++LAFLW+LKAFLEVVCT GS+VFVSILLIRG WS ++YLQ
Sbjct: 58  SVLPVPISTKLVEFSVNGVLLLAFLWVLKAFLEVVCTLGSMVFVSILLIRGIWSGVTYLQ 117

Query: 557 DTRH-RNSNIDGENSAWTGAQPAS 625
           + R+ R + +D ++ AWTG QPA+
Sbjct: 118 ERRNLRINELDDDHRAWTGTQPAA 141


>ref|XP_002276036.1| PREDICTED: uncharacterized protein LOC100251465 [Vitis vinifera]
           gi|297736403|emb|CBI25126.3| unnamed protein product
           [Vitis vinifera]
          Length = 203

 Score =  159 bits (403), Expect = 7e-37
 Identities = 82/156 (52%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
 Frame = +2

Query: 161 HYYTRDAGIITDPRNWSSARFTNLVNXXXXXXXXXXXXXXXXXXXXRSLDLLVRFIQNMF 340
           H+      ++ DPRNW+  R    V                     RSLDLLVRF+QN+F
Sbjct: 51  HFSQEGDHLVDDPRNWTRNRS---VVAGEYGDDEDEDDEDDEEEEDRSLDLLVRFVQNVF 107

Query: 341 RKISKRARKAVRSVLPVSISNKLVGFSVNGVIILAFLWILKAFLEVVCTFGSLVFVSILL 520
           +KISKR RKAVRSVLPV IS KLVGFSV+GV++L FLW+LKAFLEV+CT GS+VFVSIL+
Sbjct: 108 KKISKRTRKAVRSVLPVPISTKLVGFSVDGVLMLTFLWVLKAFLEVICTLGSVVFVSILV 167

Query: 521 IRGTWSAISYLQDTR-HRNSNIDGENSAWTGAQPAS 625
           IRG W+ +SY+Q+ R H  + +  ++ AWTG QP +
Sbjct: 168 IRGIWTGVSYVQENRNHTGNELGDDHRAWTGTQPTT 203


>ref|XP_002867158.1| hypothetical protein ARALYDRAFT_491300 [Arabidopsis lyrata subsp.
           lyrata] gi|297312994|gb|EFH43417.1| hypothetical protein
           ARALYDRAFT_491300 [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  156 bits (395), Expect = 6e-36
 Identities = 76/110 (69%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = +2

Query: 299 RSLDLLVRFIQNMFRKISKRARKAVRSVLPVSISNKLVGFSVNGVIILAFLWILKAFLEV 478
           RSLDLL+RF++N+FRKISKRARKAVRS+LPVSIS KLVGFSVNGV+ILAFLWILKAFLEV
Sbjct: 99  RSLDLLLRFVENVFRKISKRARKAVRSILPVSISTKLVGFSVNGVLILAFLWILKAFLEV 158

Query: 479 VCTFGSLVFVSILLIRGTWSAISYLQDTRHRNSN-IDGENSAWTGAQPAS 625
            CT G++VF SILLIRG W+ ++Y+Q++R+   N +  +  AW G QP S
Sbjct: 159 ACTLGTIVFTSILLIRGLWAGVAYMQESRNNRINELADDPRAWNGVQPVS 208


>ref|XP_004159921.1| PREDICTED: uncharacterized LOC101213497 [Cucumis sativus]
          Length = 202

 Score =  156 bits (394), Expect = 8e-36
 Identities = 80/111 (72%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
 Frame = +2

Query: 299 RSLDLLVRFIQNMFRKISKRARKAVRSVLPVSISNKLVGFSVNGVIILAFLWILKAFLEV 478
           RSLDLLVRF++N+FRK S+RARKAVRSVLP SI  KLV FSVNGV++LAFLW+LKAFLEV
Sbjct: 92  RSLDLLVRFVENIFRKSSRRARKAVRSVLPPSIPTKLVAFSVNGVLMLAFLWVLKAFLEV 151

Query: 479 VCTFGSLVFVSILLIRGTWSAISYLQDTR-HRNSNI-DGENSAWTGAQPAS 625
           +CT G+ VFVSIL+IRG W  I YLQDTR HR   + D ++ AWTGAQPAS
Sbjct: 152 ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS 202


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