BLASTX nr result

ID: Coptis24_contig00022828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022828
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268744.1| PREDICTED: mitochondrial zinc maintenance pr...   148   8e-34
ref|XP_002321008.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33
ref|XP_004152250.1| PREDICTED: mitochondrial zinc maintenance pr...   142   3e-32
ref|XP_002523083.1| catalytic, putative [Ricinus communis] gi|22...   142   4e-32
ref|NP_001236762.1| uncharacterized protein LOC100305793 [Glycin...   140   2e-31

>ref|XP_002268744.1| PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial
           [Vitis vinifera] gi|297743889|emb|CBI36859.3| unnamed
           protein product [Vitis vinifera]
          Length = 105

 Score =  148 bits (373), Expect = 8e-34
 Identities = 76/103 (73%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
 Frame = -2

Query: 559 MGG-AVRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREA 383
           MGG A+ AYRTLLRATR SF GDT+MLK SAVE+R  FE+NRNVT   EI+ LLE AREA
Sbjct: 1   MGGEALSAYRTLLRATRKSFAGDTVMLKASAVEIRKHFEDNRNVTSQSEIQGLLESAREA 60

Query: 382 SHFITNMIVQAKLNSSGGYAVKPSQEHAGATLEVPSEEILPKS 254
           SHFI+NMIVQAKLNS GGY VKPS++HAG TLE+PSE+IL  S
Sbjct: 61  SHFISNMIVQAKLNSRGGYEVKPSKDHAGGTLEIPSEDILKSS 103


>ref|XP_002321008.1| predicted protein [Populus trichocarpa] gi|222861781|gb|EEE99323.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score =  146 bits (368), Expect = 3e-33
 Identities = 75/104 (72%), Positives = 85/104 (81%)
 Frame = -2

Query: 565 VEMGGAVRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDARE 386
           V  G A+ AYR LLRATR SF GD+LMLK SA EVR KFEENR+V+ + EI+KLLE+ARE
Sbjct: 2   VRGGEALSAYRALLRATRKSFTGDSLMLKASASEVRKKFEENRDVSSETEIQKLLEEARE 61

Query: 385 ASHFITNMIVQAKLNSSGGYAVKPSQEHAGATLEVPSEEILPKS 254
           ASHFI  MIVQAKLN  GGY VKP ++HAGATLE+PSEEIL KS
Sbjct: 62  ASHFIATMIVQAKLNDRGGYEVKPDKDHAGATLEIPSEEILRKS 105


>ref|XP_004152250.1| PREDICTED: mitochondrial zinc maintenance protein 1,
           mitochondrial-like [Cucumis sativus]
           gi|449531029|ref|XP_004172490.1| PREDICTED:
           mitochondrial zinc maintenance protein 1,
           mitochondrial-like [Cucumis sativus]
          Length = 104

 Score =  142 bits (359), Expect = 3e-32
 Identities = 71/101 (70%), Positives = 86/101 (85%)
 Frame = -2

Query: 556 GGAVRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREASH 377
           G  + AYR+LLRAT+ SF GDTLML ESA E+R KF+E+R+VT + EI KLLE+AREASH
Sbjct: 3   GEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREASH 62

Query: 376 FITNMIVQAKLNSSGGYAVKPSQEHAGATLEVPSEEILPKS 254
           FI+NMIVQAKL S GGY +KPS++HAGATLEVP+EE+L KS
Sbjct: 63  FISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 103


>ref|XP_002523083.1| catalytic, putative [Ricinus communis] gi|223537645|gb|EEF39268.1|
           catalytic, putative [Ricinus communis]
          Length = 105

 Score =  142 bits (358), Expect = 4e-32
 Identities = 74/101 (73%), Positives = 83/101 (82%)
 Frame = -2

Query: 556 GGAVRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREASH 377
           G A+ AYR+LLRATR SF GDT+ML  SA EVR KFEENR+VT D +I+KLLE+AREAS 
Sbjct: 4   GEALTAYRSLLRATRKSFAGDTMMLNASASEVRKKFEENRHVTSDTQIQKLLEEAREASE 63

Query: 376 FITNMIVQAKLNSSGGYAVKPSQEHAGATLEVPSEEILPKS 254
           FI+ MIVQAKLN  GGY VK  +EHAGATLEVPSEEIL KS
Sbjct: 64  FISTMIVQAKLNDRGGYEVKLDKEHAGATLEVPSEEILKKS 104


>ref|NP_001236762.1| uncharacterized protein LOC100305793 [Glycine max]
           gi|255626615|gb|ACU13652.1| unknown [Glycine max]
          Length = 106

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/102 (70%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
 Frame = -2

Query: 556 GGAVRAYRTLLRATRNSFRGDTLMLKESAVEVRSKFEENRNVTCDKEIEKLLEDAREASH 377
           G  + AYR LL+ATR +F GDT+MLKESAVEVR KFEEN+NV+ + EI+KLL +A EASH
Sbjct: 4   GQVLSAYRALLKATRKTFSGDTMMLKESAVEVRKKFEENKNVSSEAEIQKLLLEAEEASH 63

Query: 376 FITNMIVQAKLN-SSGGYAVKPSQEHAGATLEVPSEEILPKS 254
           FITNM+VQA+LN  SG YAVKP +EHAGATLE+PSEEI+ KS
Sbjct: 64  FITNMLVQAQLNPDSGTYAVKPCKEHAGATLELPSEEIIRKS 105


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