BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022823
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531146.1| nucleic acid binding protein, putative [Rici...   123   3e-26
ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like...   108   1e-21
gb|AFK48908.1| unknown [Lotus japonicus]                              104   1e-20
ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycin...   103   2e-20
ref|XP_002327735.1| predicted protein [Populus trichocarpa] gi|2...   103   4e-20

>ref|XP_002531146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529259|gb|EEF31231.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 137

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/137 (41%), Positives = 94/137 (68%), Gaps = 7/137 (5%)
 Frame = -2

Query: 564 MVMKSLLAFFFHLINLRK-ISSQEVSYLVFESNFLKQQNEDAHISSAVGAAT----ENGG 400
           MV K L +F ++ ++ R+ +  ++V+     +  + + ++D  ++S  G+ +    E  G
Sbjct: 1   MVFKKLASFIYNYMSPRRQLRIKDVTSYEATALNVSENSKDGELTSPGGSCSAETAEAEG 60

Query: 399 EYCSVCLSGLKGGDEIRKLPCLHEFHKVCVDRWLDLCRRTCPLCRSSV--EGESSRKKDV 226
           E+C VCLS LKGG+ +R LPC+H FH+VC+DRW ++CR+TCP+CR ++  E  + ++++ 
Sbjct: 61  EFCCVCLSRLKGGENMRVLPCMHRFHRVCIDRWFNVCRKTCPVCRFAMGQEERTYKREEQ 120

Query: 225 LTEEMVLWFSSFHVTGF 175
           LTEEMV+WFSSFHV GF
Sbjct: 121 LTEEMVIWFSSFHVAGF 137


>ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like [Glycine max]
          Length = 133

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
 Frame = -2

Query: 564 MVMKSLLAFFFHLINL----RKISSQEVSYLVFESNFLKQQNEDAHISSAVGAATENGGE 397
           M +K L++   +LI L    R   +   SY++  S+ ++   + +  S++  A+  N   
Sbjct: 1   MTLKGLVSLVINLIGLAEGTRNNDAPLPSYML--SSHIESNKQQSSESTSASASNFNEDS 58

Query: 396 YCSVCLSGLKGGDEIRKLPCLHEFHKVCVDRWLDLCRRTCPLCRSSVEG-ESSRKKDVLT 220
           +C VCLS LK  DEIR LPC H+FHK CV+RWL    +TCPLCR S+   E S + ++ T
Sbjct: 59  WCCVCLSRLKAKDEIRVLPCSHKFHKSCVNRWLKGRHKTCPLCRFSMGAEEKSHRAEMFT 118

Query: 219 EEMVLWFSSFHVTG 178
           EEM++WFSSFHV G
Sbjct: 119 EEMLIWFSSFHVAG 132


>gb|AFK48908.1| unknown [Lotus japonicus]
          Length = 113

 Score =  104 bits (260), Expect = 1e-20
 Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
 Frame = -2

Query: 564 MVMKSLLAFFFHLINLRKISSQEVSYLVFESNFLKQQNEDAHISSAVGAATENGGEYCSV 385
           M +K L++  F L+ L ++           SNF+++                 G  +C V
Sbjct: 1   MSLKGLVSLVFDLVGLAEVPRNNND----ASNFMEKSG---------------GHGWCCV 41

Query: 384 CLSGLKGGDEIRKLPCLHEFHKVCVDRWLDLCRRTCPLCRSSVEG--ESSRKKDVLTEEM 211
           CLS LK  DEIR LPCLHEFHK+CV+RWL    +TCPLCR S+    E S + ++ T+EM
Sbjct: 42  CLSRLKDRDEIRVLPCLHEFHKICVNRWLKGHHKTCPLCRFSMGAAEEKSHRAEMFTDEM 101

Query: 210 VLWFSSFHVTG 178
           V+WFSSFH+ G
Sbjct: 102 VIWFSSFHIAG 112


>ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycine max]
           gi|255632902|gb|ACU16805.1| unknown [Glycine max]
          Length = 101

 Score =  103 bits (258), Expect = 2e-20
 Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -2

Query: 456 QNEDAHISSAVGAATENGGEYCSVCLSGLKGGDEIRKLPCLHEFHKVCVDRWLDLCRRTC 277
           QN     S +  A+  N   +C VCLS LK  DEIR LPC H+FHK+CV++WL    +TC
Sbjct: 7   QNNKQQSSESASASNFNEDSWCCVCLSRLKAKDEIRVLPCSHKFHKICVNKWLKGRHKTC 66

Query: 276 PLCRSSVEG-ESSRKKDVLTEEMVLWFSSFHVTG 178
           PLCR S+   E S + ++ TEEM++WFSSFHV G
Sbjct: 67  PLCRFSMGAEEKSHRAEMFTEEMLIWFSSFHVAG 100


>ref|XP_002327735.1| predicted protein [Populus trichocarpa] gi|222836820|gb|EEE75213.1|
           predicted protein [Populus trichocarpa]
          Length = 76

 Score =  103 bits (256), Expect = 4e-20
 Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
 Frame = -2

Query: 393 CSVCLSGLKGGDEIRKLPCLHEFHKVCVDRWL-DLCRRTCPLCRSSVEGE--SSRKKDVL 223
           C VCLS LK  ++   LPCLH FHKVC++ W  ++CRRTCPLCRSS+ GE  S ++++  
Sbjct: 1   CCVCLSRLKADEDTSALPCLHRFHKVCIEGWFNNVCRRTCPLCRSSMGGEERSHKREEQF 60

Query: 222 TEEMVLWFSSFHVTGF 175
           TEEMV+WFSSFHV GF
Sbjct: 61  TEEMVIWFSSFHVAGF 76