BLASTX nr result

ID: Coptis24_contig00022820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022820
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244...   416   e-114
emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]   386   e-105
ref|XP_002511611.1| conserved hypothetical protein [Ricinus comm...   382   e-103
ref|XP_002326874.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arab...   362   1e-97

>ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
          Length = 561

 Score =  416 bits (1069), Expect = e-114
 Identities = 201/362 (55%), Positives = 259/362 (71%)
 Frame = +3

Query: 147  RPKIIQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFL 326
            R + +  AQ ALTDY H+TRSL F +AE+I +NS YS+   IS++++S ++F+  F RFL
Sbjct: 37   RSQAVLLAQKALTDYFHSTRSLPFLYAEHIGRNSFYSLYDPISKVEFSLSSFAKSFERFL 96

Query: 327  RYHPINEFEFFFESIGIPFLQLDSFLPEFEFFLNEDGSLLNVARTLSLFGFPWNKLGKLY 506
            RYHPINEFEFFFESIGI   ++  FLP  +FF  EDG +LN A  LS FGFPWNKLG LY
Sbjct: 97   RYHPINEFEFFFESIGITQKEISGFLPPNKFFFAEDGRILNAAGALSGFGFPWNKLGILY 156

Query: 507  REEVEIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAFPFVLSGNDHLSIGVDALFGVLK 686
            + E  IF KD +DL   LCR+   G    +V+GICLAFPFVL G   L +   ALF  LK
Sbjct: 157  KAEASIFDKDSDDLSRRLCRFKDYGLSNVSVIGICLAFPFVLGGKGDLGVEAGALFDDLK 216

Query: 687  RVFVDFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMNDVGEFIGKRWDVFLECSEEVLVT 866
            RVFVDFDL S V+ NVDA YE CRKI++F DLGCE   +GE +G+  ++FLE SEEVLV 
Sbjct: 217  RVFVDFDLGSFVEENVDAWYEICRKIRLFYDLGCEKGKIGELMGRSRNIFLEYSEEVLVR 276

Query: 867  KVEYFKQMNIKKEDVGLFLLCCPEVLQFDLESPVFSAMKFLKHFGLSDEELDAIALEYPY 1046
            K+++F ++N++K  +GL LL CPE+L FDLE+PV S M FLKHFGL  ++  ++A  YPY
Sbjct: 277  KMDFFCRLNVRKAGIGLLLLECPEILSFDLEAPVISVMGFLKHFGLGLQKSKSVARMYPY 336

Query: 1047 VLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDSQDEDFEKDFKDCLERFQS 1226
            VLG+N++ANLPH MRA+D HEWFF  + NGNH LL +  +   DED ++D++  LE+ QS
Sbjct: 337  VLGRNKMANLPHVMRALDLHEWFFGMMKNGNHRLLGNYVLSHPDEDLDEDYRVGLEKIQS 396

Query: 1227 GR 1232
             R
Sbjct: 397  SR 398


>emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]
          Length = 545

 Score =  386 bits (992), Expect = e-105
 Identities = 190/362 (52%), Positives = 248/362 (68%)
 Frame = +3

Query: 147  RPKIIQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFL 326
            R + +  AQ ALTDY H+TRSL F +AE+I +NS YS+   IS++++S ++F+  F RFL
Sbjct: 37   RSQAVLLAQKALTDYFHSTRSLPFLYAEHIGRNSFYSLYDPISKVEFSLSSFAKSFERFL 96

Query: 327  RYHPINEFEFFFESIGIPFLQLDSFLPEFEFFLNEDGSLLNVARTLSLFGFPWNKLGKLY 506
            RYHPINEFEFFFESIGI   ++  FLP  +FF  EDG +LN A  LS FGFPWNKLG LY
Sbjct: 97   RYHPINEFEFFFESIGITQKEISGFLPPNKFFFAEDGRILNAAGALSGFGFPWNKLGILY 156

Query: 507  REEVEIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAFPFVLSGNDHLSIGVDALFGVLK 686
            + E  IF KD +DL   LCR+   G    +V+GICLAFPFVL G   L +   ALF  LK
Sbjct: 157  KAEASIFDKDSDDLSRRLCRFKDYGLSNVSVIGICLAFPFVLGGKGDLGVEAGALFDDLK 216

Query: 687  RVFVDFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMNDVGEFIGKRWDVFLECSEEVLVT 866
            RVFV+FDL S V+ NVDA YE CRKI++F DLGCE   +GE +G+  ++FLE SEEVLV 
Sbjct: 217  RVFVBFDLGSFVEENVDAWYEICRKIRLFYDLGCEKGKIGELMGRSRNIFLEYSEEVLVR 276

Query: 867  KVEYFKQMNIKKEDVGLFLLCCPEVLQFDLESPVFSAMKFLKHFGLSDEELDAIALEYPY 1046
            K+++F ++N++K  +GL LL CPE+L FDLE+P                +  ++A  YPY
Sbjct: 277  KMDFFCRLNVRKAGIGLLLLECPEILSFDLEAP----------------KSKSVARMYPY 320

Query: 1047 VLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDSQDEDFEKDFKDCLERFQS 1226
            VLG+N++ANLPH MRA+D HEWFF  + NGNH LL +  +   DED ++D++  LE+ QS
Sbjct: 321  VLGRNKMANLPHVMRALDLHEWFFGMMKNGNHRLLGNYVLSHPDEDLDEDYRVGLEKIQS 380

Query: 1227 GR 1232
             R
Sbjct: 381  SR 382


>ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis]
            gi|223548791|gb|EEF50280.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 561

 Score =  382 bits (981), Expect = e-103
 Identities = 188/362 (51%), Positives = 255/362 (70%)
 Frame = +3

Query: 147  RPKIIQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFL 326
            + K I++AQ ALTDYLH+TRSL F +AE+ISKNSL S+++LI+ +D+S + FS    +FL
Sbjct: 29   KAKAIREAQQALTDYLHSTRSLPFAYAEHISKNSLVSLSNLIANVDFSVSDFSRSVRKFL 88

Query: 327  RYHPINEFEFFFESIGIPFLQLDSFLPEFEFFLNEDGSLLNVARTLSLFGFPWNKLGKLY 506
            RYHPINEFEFF+ESIG+ + ++ +FLP  +FF +EDGS L+ A  L+ FGFPW KLG LY
Sbjct: 89   RYHPINEFEFFYESIGLDYNEVRNFLPSNKFFFSEDGSALDAACALASFGFPWYKLGTLY 148

Query: 507  REEVEIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAFPFVLSGNDHLSIGVDALFGVLK 686
            +E+  IF +D  +L S L  +   GF   +V+GICLAFP VLSG+  L   +DALF  LK
Sbjct: 149  KEDSSIFSRDPLELKSRLSGFKECGFSNTSVIGICLAFPHVLSGD--LGGEIDALFDDLK 206

Query: 687  RVFVDFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMNDVGEFIGKRWDVFLECSEEVLVT 866
            R F+DF++ S V G+VDA Y+ C KI+VF DLG     VG+ IGK   +F++C  EVL+ 
Sbjct: 207  RAFIDFNMGSCVQGHVDAWYDICLKIRVFYDLGLNKGKVGDIIGKSKTIFIDCPIEVLIK 266

Query: 867  KVEYFKQMNIKKEDVGLFLLCCPEVLQFDLESPVFSAMKFLKHFGLSDEELDAIALEYPY 1046
            K EYF +  + K DVG+ LL  PE+L FDLE+P+ S    L+HFG + EEL+ +  +YP+
Sbjct: 267  KTEYFCRFGVSKVDVGMLLLQKPELLCFDLETPLISVKGILEHFGFNVEELEVVIHKYPH 326

Query: 1047 VLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDSQDEDFEKDFKDCLERFQS 1226
            V+G+N++ANLPH MRA+D H WFF+KI +G H LLA   +   DED +K+F D LER + 
Sbjct: 327  VMGRNKMANLPHVMRAMDLHLWFFNKIKDGYHELLASYALRDPDEDLDKEFSDSLERIRV 386

Query: 1227 GR 1232
             R
Sbjct: 387  SR 388


>ref|XP_002326874.1| predicted protein [Populus trichocarpa] gi|222835189|gb|EEE73624.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  380 bits (975), Expect = e-103
 Identities = 190/358 (53%), Positives = 251/358 (70%)
 Frame = +3

Query: 159  IQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFLRYHP 338
            I+ AQ ALTDYLH+TRSL +++A+ ISKNSL S+++L+S + ++  TF++   ++LRYHP
Sbjct: 40   IKLAQQALTDYLHSTRSLPYSYADQISKNSLVSLSNLVSNIHFTSPTFATSLQKYLRYHP 99

Query: 339  INEFEFFFESIGIPFLQLDSFLPEFEFFLNEDGSLLNVARTLSLFGFPWNKLGKLYREEV 518
            INE EFF+ESIGI + ++  FL   +FF++E+GS +NV+  L  FGFPWNKLG LY+EE 
Sbjct: 100  INELEFFYESIGIDYDEVSGFLSNDKFFISEEGSAINVSCVLCDFGFPWNKLGMLYKEEK 159

Query: 519  EIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAFPFVLSGNDHLSIGVDALFGVLKRVFV 698
             +F     ++ S LC      F T +V+GI LAFPFVL G   LS  + ALF  LKRVFV
Sbjct: 160  RVFSMSEEEVKSRLCGLKGFRFSTTSVIGISLAFPFVLRGE--LSGEIGALFDDLKRVFV 217

Query: 699  DFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMNDVGEFIGKRWDVFLECSEEVLVTKVEY 878
            DFDL+S V+GNVDA YE CRKI+VF DLGCE   VGE +GK   +F++   EVLV K E+
Sbjct: 218  DFDLESCVEGNVDAWYEVCRKIRVFYDLGCEKGKVGELMGKSKRIFVDYPVEVLVQKAEF 277

Query: 879  FKQMNIKKEDVGLFLLCCPEVLQFDLESPVFSAMKFLKHFGLSDEELDAIALEYPYVLGK 1058
            F +  ++KEDVGL LL  P +L F LE  V S    LKHFGLS EEL ++A  Y +V G+
Sbjct: 278  FCKFGVRKEDVGLLLLTKPGILDFQLEGQVISVKGLLKHFGLSAEELKSVAQNYGHVFGR 337

Query: 1059 NRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDSQDEDFEKDFKDCLERFQSGR 1232
            N++ANLPH MRA++ HEWFF+KI +GNH LLA   +   DED ++ ++D LER Q  R
Sbjct: 338  NKMANLPHVMRAMELHEWFFNKIKDGNHQLLASYVMSDPDEDLDEKYRDSLERIQCTR 395


>ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
            lyrata] gi|297322390|gb|EFH52811.1| hypothetical protein
            ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  362 bits (928), Expect = 1e-97
 Identities = 180/358 (50%), Positives = 242/358 (67%)
 Frame = +3

Query: 159  IQQAQHALTDYLHATRSLSFTHAENISKNSLYSITSLISRMDYSYTTFSSDFLRFLRYHP 338
            I +AQ A+TDYLH TRSLS+THAE I+ N+  SI +LI ++D+S  TFS    + L YHP
Sbjct: 34   IGKAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHP 93

Query: 339  INEFEFFFESIGIPFLQLDSFLPEFEFFLNEDGSLLNVARTLSLFGFPWNKLGKLYREEV 518
            INEFEFFFESIGI + ++  FLPE +FF +ED ++L+ A  LS FGFPWNKLGKLY+EE 
Sbjct: 94   INEFEFFFESIGIDYSEVCEFLPEKKFFFSEDRTVLDAACALSGFGFPWNKLGKLYKEER 153

Query: 519  EIFGKDCNDLDSLLCRYVSLGFDTCTVVGICLAFPFVLSGNDHLSIGVDALFGVLKRVFV 698
             +F +   ++DS L ++  LGF T  V+G CLAFP  L G   L   +  LF  LKR+F 
Sbjct: 154  LVFVQSPGEIDSRLLKFKDLGFSTVAVIGTCLAFPHALCGGGELGSEILCLFVKLKRLFD 213

Query: 699  DFDLKSSVDGNVDASYEFCRKIKVFIDLGCEMNDVGEFIGKRWDVFLECSEEVLVTKVEY 878
            +FD +   + NVD+     RKI+VF DLGCE  ++ E +G+   +FLE SEE LV K EY
Sbjct: 214  EFDSQHLCEENVDSWLAVSRKIRVFYDLGCENEEMWELMGRNKSLFLEYSEEALVKKAEY 273

Query: 879  FKQMNIKKEDVGLFLLCCPEVLQFDLESPVFSAMKFLKHFGLSDEELDAIALEYPYVLGK 1058
            F +  ++KEDV L +L  P ++ FDLE PV S    LKHFGL  +E+DA+A +YPYVLG+
Sbjct: 274  FCRFGVRKEDVALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVLGR 333

Query: 1059 NRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDSQDEDFEKDFKDCLERFQSGR 1232
            N+L NLP+ +RAID HE   D + NG+HHLLA   +    ED ++++++ LE  Q+ R
Sbjct: 334  NKLKNLPYVLRAIDLHERIVDILKNGSHHLLASYSVMDPYEDLDREYQEGLEELQNSR 391


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