BLASTX nr result

ID: Coptis24_contig00022815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022815
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis...    90   2e-16
emb|CBI34692.3| unnamed protein product [Vitis vinifera]               89   5e-16
emb|CBI34691.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002269469.1| PREDICTED: protein LURP-one-related 4 [Vitis...    85   7e-15
ref|XP_002304253.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 204

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/86 (53%), Positives = 62/86 (72%)
 Frame = -1

Query: 293 SPCEVIIMAAGQSNKSCYHIEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGEDVMK 114
           S C+V +    ++   CY I+G +GK  + KIV+  GGL+AEV QKQ+ SG+ LGEDV+ 
Sbjct: 121 SSCQVTVRP-NEAQSYCYRIQGLTGKSAF-KIVDSQGGLLAEVEQKQTSSGVVLGEDVLN 178

Query: 113 LVVEANVDHSLVMGIVIVYSLMNHRM 36
           LVVE +VDHSLVM +V VY L++HRM
Sbjct: 179 LVVEPHVDHSLVMALVAVYGLIHHRM 204


>emb|CBI34692.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/86 (52%), Positives = 62/86 (72%)
 Frame = -1

Query: 293 SPCEVIIMAAGQSNKSCYHIEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGEDVMK 114
           S C+V +    ++   CY I+G +GK  + KIV+  GGL+AEV QKQ+ SG+ LGEDV+ 
Sbjct: 121 SSCQVTVRP-NEAQSYCYRIQGLTGKSAF-KIVDSQGGLLAEVEQKQTSSGVVLGEDVLN 178

Query: 113 LVVEANVDHSLVMGIVIVYSLMNHRM 36
           LVVE +VDHSLVM +V VY L++HR+
Sbjct: 179 LVVEPHVDHSLVMALVAVYGLIHHRI 204


>emb|CBI34691.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = -1

Query: 293 SPCEVIIMAAGQSNKSCYH-IEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGEDVM 117
           S CEV +       +SCY+ I+G +GK  + KIVN  GG++AEV QKQ+ SG+ LG+DV+
Sbjct: 316 SSCEVTVRP--NEAQSCYYRIQGLAGKSTF-KIVNSEGGVMAEVKQKQTSSGVVLGDDVL 372

Query: 116 KLVVEANVDHSLVMGIVIVYSLMNHRM 36
            LVVE +VDHSLVM +V V  L++HRM
Sbjct: 373 NLVVEPHVDHSLVMALVAVCGLIHHRM 399



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = -1

Query: 293 SPCEVIIMAAGQSNKSCYHIEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGEDVMK 114
           S CEV +    ++    Y I+G +GK  + KIVN  GG++AEV QKQ+ SG+ LG+DV+ 
Sbjct: 119 SSCEVTVRP-NEAQSYHYRIQGLAGKSTF-KIVNSEGGVMAEVKQKQTSSGVVLGDDVLD 176

Query: 113 LVVEANVDHSLVMGIV 66
           LVVE +VDHSLVM +V
Sbjct: 177 LVVEPHVDHSLVMALV 192


>ref|XP_002269469.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 206

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = -1

Query: 293 SPCEVIIMAAGQSNKSCYH-IEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGEDVM 117
           S CEV +       +SCY+ I+G +GK  + KIVN  GG++AEV QKQ+ SG+ LG+DV+
Sbjct: 123 SSCEVTVRP--NEAQSCYYRIQGLAGKSTF-KIVNSEGGVMAEVKQKQTSSGVVLGDDVL 179

Query: 116 KLVVEANVDHSLVMGIVIVYSLMNHRM 36
            LVVE +VDHSLVM +V V  L++HRM
Sbjct: 180 NLVVEPHVDHSLVMALVAVCGLIHHRM 206


>ref|XP_002304253.1| predicted protein [Populus trichocarpa] gi|222841685|gb|EEE79232.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = -1

Query: 293 SPCEVIIMAAGQSNKSC-YHIEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGEDVM 117
           +PC + +      N+ C Y IE  + K  Y KIV++ GGL+AEV +KQS  G+ LGEDVM
Sbjct: 116 APCNITVGL--DKNQPCQYMIESWTSKSTY-KIVDKCGGLIAEVQRKQSACGVVLGEDVM 172

Query: 116 KLVVEANVDHSLVMGIVIVYSLMNHRM 36
            +VVE  +DHSL+MG+V+VYSL+N +M
Sbjct: 173 TMVVEPFIDHSLIMGLVVVYSLINSKM 199


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