BLASTX nr result

ID: Coptis24_contig00022800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022800
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-50
ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig...   149   4e-49
ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein lig...   149   4e-49
ref|NP_566724.1| putative E3 ubiquitin-protein ligase XBAT35 [Ar...   143   5e-49
dbj|BAA95741.1| unnamed protein product [Arabidopsis thaliana]        143   5e-49

>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  147 bits (371), Expect(2) = 1e-50
 Identities = 71/87 (81%), Positives = 75/87 (86%)
 Frame = -2

Query: 494 MGLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLIAACLNAELLHVAKTL 315
           MG  QSKDELLYQQVN  N EGIK LCREGARLEWIDKEGKTPLI ACLN +L +VAKTL
Sbjct: 1   MGQQQSKDELLYQQVNCSNIEGIKNLCREGARLEWIDKEGKTPLIVACLNPQLFNVAKTL 60

Query: 314 IQLGANVNAYRPGGHAGTPLHHAAKRG 234
           I+LGANVNAYRPG + G PLHHAAKRG
Sbjct: 61  IELGANVNAYRPGRNGGAPLHHAAKRG 87



 Score = 78.6 bits (192), Expect(2) = 1e-50
 Identities = 38/45 (84%), Positives = 40/45 (88%)
 Frame = -1

Query: 135 LEQTVKLLLSHGANASVVNDDCQTPLEVARIKGYTNVVRTIESHI 1
           LE TVKLLLSHGANA ++NDDCQTPLEVAR KGY NVVR IESHI
Sbjct: 88  LENTVKLLLSHGANALMMNDDCQTPLEVARAKGYGNVVRAIESHI 132


>ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score =  149 bits (377), Expect(2) = 4e-49
 Identities = 71/87 (81%), Positives = 77/87 (88%)
 Frame = -2

Query: 494 MGLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLIAACLNAELLHVAKTL 315
           MG  QSKDELLYQQV+YGN EGIKALCR+GA LEWIDKE KTPLI AC+N EL +VA+TL
Sbjct: 1   MGQQQSKDELLYQQVSYGNTEGIKALCRDGAGLEWIDKEAKTPLIVACMNPELHNVARTL 60

Query: 314 IQLGANVNAYRPGGHAGTPLHHAAKRG 234
           I+LGANVNAYRPG H GTPLHHAAKRG
Sbjct: 61  IELGANVNAYRPGRHNGTPLHHAAKRG 87



 Score = 71.2 bits (173), Expect(2) = 4e-49
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = -1

Query: 135 LEQTVKLLLSHGANASVVNDDCQTPLEVARIKGYTNVVRTIESHI 1
           LE  VKLLLS+GAN  ++NDDCQ+PL+VAR KG++NVVRTIESHI
Sbjct: 88  LENNVKLLLSNGANPLIMNDDCQSPLDVARAKGHSNVVRTIESHI 132


>ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score =  149 bits (377), Expect(2) = 4e-49
 Identities = 71/87 (81%), Positives = 77/87 (88%)
 Frame = -2

Query: 494 MGLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLIAACLNAELLHVAKTL 315
           MG  QSKDELLYQQV+YGN EGIKALCR+GA LEWIDKE KTPLI AC+N EL +VA+TL
Sbjct: 1   MGQQQSKDELLYQQVSYGNTEGIKALCRDGAGLEWIDKEAKTPLIVACMNPELHNVARTL 60

Query: 314 IQLGANVNAYRPGGHAGTPLHHAAKRG 234
           I+LGANVNAYRPG H GTPLHHAAKRG
Sbjct: 61  IELGANVNAYRPGRHNGTPLHHAAKRG 87



 Score = 71.2 bits (173), Expect(2) = 4e-49
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = -1

Query: 135 LEQTVKLLLSHGANASVVNDDCQTPLEVARIKGYTNVVRTIESHI 1
           LE  VKLLLS+GAN  ++NDDCQ+PL+VAR KG++NVVRTIESHI
Sbjct: 88  LENNVKLLLSNGANPLIMNDDCQSPLDVARAKGHSNVVRTIESHI 132


>ref|NP_566724.1| putative E3 ubiquitin-protein ligase XBAT35 [Arabidopsis thaliana]
           gi|122233562|sp|Q4FE47.1|XB35_ARATH RecName:
           Full=Putative E3 ubiquitin-protein ligase XBAT35;
           AltName: Full=Ankyrin repeat domain and RING
           finger-containing protein XBAT35; AltName: Full=Protein
           XB3 homolog 5 gi|70905085|gb|AAZ14068.1| At3g23280
           [Arabidopsis thaliana] gi|332643225|gb|AEE76746.1|
           putative E3 ubiquitin-protein ligase XBAT35 [Arabidopsis
           thaliana]
          Length = 462

 Score =  143 bits (360), Expect(2) = 5e-49
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = -2

Query: 494 MGLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLIAACLNAELLHVAKTL 315
           MG  QSK ELLYQQV+YGN+EGI+AL R+G  LEW+D+EGKTPLI AC+N+EL  VAKTL
Sbjct: 1   MGQQQSKGELLYQQVSYGNSEGIRALHRDGGDLEWMDREGKTPLILACMNSELFDVAKTL 60

Query: 314 IQLGANVNAYRPGGHAGTPLHHAAKRG 234
           I+LG+NVNAYRPG HAGTPLHHAAKRG
Sbjct: 61  IELGSNVNAYRPGRHAGTPLHHAAKRG 87



 Score = 77.4 bits (189), Expect(2) = 5e-49
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = -1

Query: 135 LEQTVKLLLSHGANASVVNDDCQTPLEVARIKGYTNVVRTIESHI 1
           LE TVKLLLSHGAN  V+NDDCQTPLEVAR+KG++NVVR IE HI
Sbjct: 88  LENTVKLLLSHGANPLVLNDDCQTPLEVARVKGFSNVVRAIEKHI 132


>dbj|BAA95741.1| unnamed protein product [Arabidopsis thaliana]
          Length = 454

 Score =  143 bits (360), Expect(2) = 5e-49
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = -2

Query: 494 MGLSQSKDELLYQQVNYGNAEGIKALCREGARLEWIDKEGKTPLIAACLNAELLHVAKTL 315
           MG  QSK ELLYQQV+YGN+EGI+AL R+G  LEW+D+EGKTPLI AC+N+EL  VAKTL
Sbjct: 1   MGQQQSKGELLYQQVSYGNSEGIRALHRDGGDLEWMDREGKTPLILACMNSELFDVAKTL 60

Query: 314 IQLGANVNAYRPGGHAGTPLHHAAKRG 234
           I+LG+NVNAYRPG HAGTPLHHAAKRG
Sbjct: 61  IELGSNVNAYRPGRHAGTPLHHAAKRG 87



 Score = 77.4 bits (189), Expect(2) = 5e-49
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = -1

Query: 135 LEQTVKLLLSHGANASVVNDDCQTPLEVARIKGYTNVVRTIESHI 1
           LE TVKLLLSHGAN  V+NDDCQTPLEVAR+KG++NVVR IE HI
Sbjct: 88  LENTVKLLLSHGANPLVLNDDCQTPLEVARVKGFSNVVRAIEKHI 132


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