BLASTX nr result

ID: Coptis24_contig00022797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022797
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322991.1| predicted protein [Populus trichocarpa] gi|2...   537   e-150
ref|XP_004137702.1| PREDICTED: succinate/fumarate mitochondrial ...   533   e-149
ref|XP_002263020.1| PREDICTED: succinate/fumarate mitochondrial ...   530   e-148
ref|XP_003544232.1| PREDICTED: succinate/fumarate mitochondrial ...   520   e-145
ref|XP_003519192.1| PREDICTED: succinate/fumarate mitochondrial ...   518   e-144

>ref|XP_002322991.1| predicted protein [Populus trichocarpa] gi|222867621|gb|EEF04752.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  537 bits (1383), Expect = e-150
 Identities = 259/309 (83%), Positives = 282/309 (91%)
 Frame = +1

Query: 88   QNPNDEKPKKTVPIPPYMKSISGSIGGVVEATCLQPIDVIKTRLQLDRSGTYKGILHCGK 267
            ++ ND+KP     IPPYMK+ISGS+GG VEA+CLQPIDVIKTRLQLDRSG YKGI+HCG 
Sbjct: 4    ESSNDKKPT----IPPYMKAISGSLGGAVEASCLQPIDVIKTRLQLDRSGNYKGIIHCGS 59

Query: 268  TIVKTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQTGFKDSETGVISNRGRLISGFGA 447
            TIVKTEGVRALWKGLTPFATHLTLKYALRMGSNAV Q+ FKDSETG +SN+GRL+SGFGA
Sbjct: 60   TIVKTEGVRALWKGLTPFATHLTLKYALRMGSNAVFQSAFKDSETGKLSNQGRLMSGFGA 119

Query: 448  GVIEALVIVTPFEVVKIKLQQQKGLRPDLLKYKGPVHCARMIIREEGLLGLWAGAAPTVM 627
            GV+EAL IVTPFEVVKI+LQQQKGL P+LLKYKGP+HCA  IIREEG+LGLWAGAAPTVM
Sbjct: 120  GVLEALAIVTPFEVVKIRLQQQKGLSPELLKYKGPIHCAHTIIREEGVLGLWAGAAPTVM 179

Query: 628  RNGTNQAVMFTAKNAFDVLLWKKHEGDGKTLQPWQSMVSGFLAGTAGPVCTGPFDVVKTR 807
            RNGTNQA MFTAKNAFDVLLWKKHEGDG+ LQPWQSM+SGFLAGTAGPVCTGPFDVVKTR
Sbjct: 180  RNGTNQAAMFTAKNAFDVLLWKKHEGDGRVLQPWQSMISGFLAGTAGPVCTGPFDVVKTR 239

Query: 808  LMAQSGSGSDAKYKGMFHAIRTIFAEEGLLALWKGLLPRLMRIPPGQAIMWGVADQVIGF 987
            LMAQS  G + KYKGM HAIRTI+AEEGLLALWKGLLPRLMRIPPGQAIMW VADQ+IG 
Sbjct: 240  LMAQSREGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQIIGL 299

Query: 988  YEKTHLHKA 1014
            YE+ +LH A
Sbjct: 300  YERRYLHIA 308


>ref|XP_004137702.1| PREDICTED: succinate/fumarate mitochondrial transporter-like [Cucumis
            sativus] gi|449483528|ref|XP_004156616.1| PREDICTED:
            succinate/fumarate mitochondrial transporter-like
            [Cucumis sativus]
          Length = 317

 Score =  533 bits (1374), Expect = e-149
 Identities = 255/314 (81%), Positives = 282/314 (89%)
 Frame = +1

Query: 79   EQAQNPNDEKPKKTVPIPPYMKSISGSIGGVVEATCLQPIDVIKTRLQLDRSGTYKGILH 258
            ++A+  N E+      IPPYMK+ISGS+GGV+EA CLQPIDVIKTRLQLDRSG YKGI+H
Sbjct: 4    QEARGSNKEQSSTKKSIPPYMKAISGSLGGVMEACCLQPIDVIKTRLQLDRSGAYKGIVH 63

Query: 259  CGKTIVKTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQTGFKDSETGVISNRGRLISG 438
            CG T+ +TEGVRALWKGLTPFATHLTLKYALRMGSNAVLQT FKDSETG +SN  RLISG
Sbjct: 64   CGTTVTQTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQTAFKDSETGKLSNHARLISG 123

Query: 439  FGAGVIEALVIVTPFEVVKIKLQQQKGLRPDLLKYKGPVHCARMIIREEGLLGLWAGAAP 618
            FGAGV+EALVIVTPFEVVKI+LQQQKGL P+LLKYKGPVHCARMIIREEGLLGLWAGAAP
Sbjct: 124  FGAGVLEALVIVTPFEVVKIRLQQQKGLTPELLKYKGPVHCARMIIREEGLLGLWAGAAP 183

Query: 619  TVMRNGTNQAVMFTAKNAFDVLLWKKHEGDGKTLQPWQSMVSGFLAGTAGPVCTGPFDVV 798
            TVMRNGTNQA MFTAKNAFD++LW +HEGDG+ LQPWQSM+SGFLAGTAGP+CTGPFDVV
Sbjct: 184  TVMRNGTNQAAMFTAKNAFDIVLWNRHEGDGQVLQPWQSMISGFLAGTAGPLCTGPFDVV 243

Query: 799  KTRLMAQSGSGSDAKYKGMFHAIRTIFAEEGLLALWKGLLPRLMRIPPGQAIMWGVADQV 978
            KTRLMAQS    + KYKGMFHAIRTI+AEEGL ALWKGLLPRLMRIPPGQAI+W VADQ+
Sbjct: 244  KTRLMAQSRGTGELKYKGMFHAIRTIYAEEGLFALWKGLLPRLMRIPPGQAIVWAVADQI 303

Query: 979  IGFYEKTHLHKAPL 1020
            IG YE+ +L  AP+
Sbjct: 304  IGLYERRYLQDAPI 317


>ref|XP_002263020.1| PREDICTED: succinate/fumarate mitochondrial transporter [Vitis
            vinifera] gi|147857058|emb|CAN81800.1| hypothetical
            protein VITISV_020062 [Vitis vinifera]
            gi|296081115|emb|CBI18247.3| unnamed protein product
            [Vitis vinifera]
          Length = 306

 Score =  530 bits (1364), Expect = e-148
 Identities = 252/302 (83%), Positives = 275/302 (91%)
 Frame = +1

Query: 115  KTVPIPPYMKSISGSIGGVVEATCLQPIDVIKTRLQLDRSGTYKGILHCGKTIVKTEGVR 294
            K   IPPY+K++SGSIGG+VEA+CLQPIDVIKTRLQLD SGTYKGI+HCG T+ +TEGVR
Sbjct: 5    KKTTIPPYVKALSGSIGGIVEASCLQPIDVIKTRLQLDTSGTYKGIIHCGATVYRTEGVR 64

Query: 295  ALWKGLTPFATHLTLKYALRMGSNAVLQTGFKDSETGVISNRGRLISGFGAGVIEALVIV 474
            ALWKGLTPFATHLTLKY LRMGSNA+ Q+ FKDS+TG +SN GRL+SGFGAGV+EALVIV
Sbjct: 65   ALWKGLTPFATHLTLKYTLRMGSNALFQSAFKDSQTGQLSNTGRLLSGFGAGVLEALVIV 124

Query: 475  TPFEVVKIKLQQQKGLRPDLLKYKGPVHCARMIIREEGLLGLWAGAAPTVMRNGTNQAVM 654
            TPFEVVKI+LQQQ+GL P+LLKYKGP+HCAR IIREEGL GLWAGAAPTVMRNGTNQA M
Sbjct: 125  TPFEVVKIRLQQQRGLSPELLKYKGPIHCARTIIREEGLRGLWAGAAPTVMRNGTNQAAM 184

Query: 655  FTAKNAFDVLLWKKHEGDGKTLQPWQSMVSGFLAGTAGPVCTGPFDVVKTRLMAQSGSGS 834
            FTAKNAFD +LWKK EGDGK LQPWQSM+SGFLAGTAGPVCTGPFDVVKTRLMAQ  +G 
Sbjct: 185  FTAKNAFDGILWKKQEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQGRAGG 244

Query: 835  DAKYKGMFHAIRTIFAEEGLLALWKGLLPRLMRIPPGQAIMWGVADQVIGFYEKTHLHKA 1014
              KYKGM HAIRTIFAEEGLLALWKGLLPRLMRIPPGQAIMWGVADQV GFYE+ H+H A
Sbjct: 245  KLKYKGMVHAIRTIFAEEGLLALWKGLLPRLMRIPPGQAIMWGVADQVTGFYERRHIHNA 304

Query: 1015 PL 1020
            PL
Sbjct: 305  PL 306



 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 30/74 (40%), Positives = 41/74 (55%)
 Frame = +1

Query: 700 EGDGKTLQPWQSMVSGFLAGTAGPVCTGPFDVVKTRLMAQSGSGSDAKYKGMFHAIRTIF 879
           E    T+ P+   +SG + G     C  P DV+KTRL   + SG+   YKG+ H   T++
Sbjct: 3   ESKKTTIPPYVKALSGSIGGIVEASCLQPIDVIKTRLQLDT-SGT---YKGIIHCGATVY 58

Query: 880 AEEGLLALWKGLLP 921
             EG+ ALWKGL P
Sbjct: 59  RTEGVRALWKGLTP 72


>ref|XP_003544232.1| PREDICTED: succinate/fumarate mitochondrial transporter-like [Glycine
            max]
          Length = 392

 Score =  520 bits (1340), Expect = e-145
 Identities = 252/317 (79%), Positives = 281/317 (88%), Gaps = 1/317 (0%)
 Frame = +1

Query: 73   KMEQAQNPNDEKPKKTVPIPPYMKSISGSIGGVVEATCLQPIDVIKTRLQLDRSGTYKGI 252
            K + AQ+  +  PKK+  IPPYMK+ISGS+GG++EA+CLQPIDVIKTRLQLDRSG YKGI
Sbjct: 78   KQDVAQDNTNSYPKKS--IPPYMKAISGSLGGIMEASCLQPIDVIKTRLQLDRSGNYKGI 135

Query: 253  LHCGKTIVKTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQTGFKDSETGVISNRGRLI 432
            LHCG TI +TEGVRALWKGLTPFATHLTLKY+LRMGSNAVLQ+ FKD ETG +S  GR +
Sbjct: 136  LHCGATISRTEGVRALWKGLTPFATHLTLKYSLRMGSNAVLQSAFKDPETGKVSGHGRFL 195

Query: 433  SGFGAGVIEALVIVTPFEVVKIKLQQQKGLRPDLLKYKGPVHCARMIIREEGLLGLWAGA 612
            SGFGAGV+EA++IVTPFEVVKI+LQQQ+GL P+LLKYKGPVHCARMIIREEG  GLWAG 
Sbjct: 196  SGFGAGVLEAVIIVTPFEVVKIRLQQQRGLSPELLKYKGPVHCARMIIREEGFCGLWAGV 255

Query: 613  APTVMRNGTNQAVMFTAKNAFDVLLWKKHEGDGKTLQPWQSMVSGFLAGTAGPVCTGPFD 792
            APTVMRNGTNQ+ MFTAKNAFDVLLWKK EGDG+ LQPWQSM+SGFLAGTAGP+CTGPFD
Sbjct: 256  APTVMRNGTNQSAMFTAKNAFDVLLWKKDEGDGRVLQPWQSMISGFLAGTAGPICTGPFD 315

Query: 793  VVKTRLMAQSGSGSDA-KYKGMFHAIRTIFAEEGLLALWKGLLPRLMRIPPGQAIMWGVA 969
            VVKTRLMAQS  G    KYKGM HAIRTI+AEEGLLALWKGLLPRLMRIPPGQAIMWGVA
Sbjct: 316  VVKTRLMAQSREGGGVLKYKGMIHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWGVA 375

Query: 970  DQVIGFYEKTHLHKAPL 1020
            DQ+IG YE+ +L  + L
Sbjct: 376  DQIIGLYERRYLQLSTL 392


>ref|XP_003519192.1| PREDICTED: succinate/fumarate mitochondrial transporter-like [Glycine
            max]
          Length = 334

 Score =  518 bits (1333), Expect = e-144
 Identities = 250/317 (78%), Positives = 280/317 (88%), Gaps = 1/317 (0%)
 Frame = +1

Query: 73   KMEQAQNPNDEKPKKTVPIPPYMKSISGSIGGVVEATCLQPIDVIKTRLQLDRSGTYKGI 252
            K + AQ+  +   K +  IPPYMK+ISGS+GG++EA+CLQPIDVIKTRLQLDRSG YKGI
Sbjct: 20   KQDVAQDNTNSYSKNS--IPPYMKAISGSLGGIMEASCLQPIDVIKTRLQLDRSGNYKGI 77

Query: 253  LHCGKTIVKTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQTGFKDSETGVISNRGRLI 432
            LHCG TI +TEGVRALWKGLTPFATHLTLKYALRMGSNAVLQ+ FKD ETG +S  GR++
Sbjct: 78   LHCGATISRTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQSAFKDPETGKLSGYGRIL 137

Query: 433  SGFGAGVIEALVIVTPFEVVKIKLQQQKGLRPDLLKYKGPVHCARMIIREEGLLGLWAGA 612
            SGFGAGV+EA++IVTPFEVVKI+LQQQ+GL P+LLKYKGPVHCARMIIREEG  GLWAG 
Sbjct: 138  SGFGAGVLEAIIIVTPFEVVKIRLQQQRGLSPELLKYKGPVHCARMIIREEGFRGLWAGV 197

Query: 613  APTVMRNGTNQAVMFTAKNAFDVLLWKKHEGDGKTLQPWQSMVSGFLAGTAGPVCTGPFD 792
            APTVMRNGTNQ+ MFTAKNAFDVLLWKKHEGDG+ L PWQSM+SGFLAGTAGP+CTGPFD
Sbjct: 198  APTVMRNGTNQSAMFTAKNAFDVLLWKKHEGDGRVLLPWQSMISGFLAGTAGPICTGPFD 257

Query: 793  VVKTRLMAQSGSGSDA-KYKGMFHAIRTIFAEEGLLALWKGLLPRLMRIPPGQAIMWGVA 969
            VVKTRLMAQ+  G    KYKGM HAIRTI+ EEGLLALWKGLLPRLMRIPPGQAIMWGVA
Sbjct: 258  VVKTRLMAQTREGGGVLKYKGMIHAIRTIYVEEGLLALWKGLLPRLMRIPPGQAIMWGVA 317

Query: 970  DQVIGFYEKTHLHKAPL 1020
            DQ+IG YE+ +LH + L
Sbjct: 318  DQIIGLYERRYLHHSTL 334


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