BLASTX nr result

ID: Coptis24_contig00022791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022791
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...   134   2e-29
emb|CBI26466.3| unnamed protein product [Vitis vinifera]              134   2e-29
ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [...   119   5e-25
ref|XP_002520086.1| conserved hypothetical protein [Ricinus comm...   114   2e-23
ref|XP_003539001.1| PREDICTED: uncharacterized protein LOC100787...   109   5e-22

>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score =  134 bits (337), Expect = 2e-29
 Identities = 74/135 (54%), Positives = 84/135 (62%)
 Frame = -1

Query: 664 MDSSLDSTGRLITSRVPSFPQSKSRNGSIMQTDYPQMHTHQDFGNTGITVALSKQTQQQQ 485
           MDS LDST  L+ SRV SFP SKS   SI+Q+DYPQ                        
Sbjct: 220 MDSPLDSTWPLMPSRVSSFPPSKSSENSILQSDYPQ------------------------ 255

Query: 484 HCFFGDEFGLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLSISIPMA 305
           H FF  EF   E VKQEGQSLRPFFDEWPKTRD+WS L+++RSN+TSFSTTQLSISIPMA
Sbjct: 256 HSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRDSWSGLEEERSNQTSFSTTQLSISIPMA 315

Query: 304 XXXXXXXXXXSPNDD 260
                     SP+D+
Sbjct: 316 SSDFSTTSSRSPHDN 330


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  134 bits (337), Expect = 2e-29
 Identities = 74/135 (54%), Positives = 84/135 (62%)
 Frame = -1

Query: 664 MDSSLDSTGRLITSRVPSFPQSKSRNGSIMQTDYPQMHTHQDFGNTGITVALSKQTQQQQ 485
           MDS LDST  L+ SRV SFP SKS   SI+Q+DYPQ                        
Sbjct: 263 MDSPLDSTWPLMPSRVSSFPPSKSSENSILQSDYPQ------------------------ 298

Query: 484 HCFFGDEFGLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLSISIPMA 305
           H FF  EF   E VKQEGQSLRPFFDEWPKTRD+WS L+++RSN+TSFSTTQLSISIPMA
Sbjct: 299 HSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRDSWSGLEEERSNQTSFSTTQLSISIPMA 358

Query: 304 XXXXXXXXXXSPNDD 260
                     SP+D+
Sbjct: 359 SSDFSTTSSRSPHDN 373


>ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [Cucumis sativus]
           gi|449484096|ref|XP_004156783.1| PREDICTED:
           growth-regulating factor 3-like [Cucumis sativus]
          Length = 336

 Score =  119 bits (298), Expect = 5e-25
 Identities = 61/120 (50%), Positives = 77/120 (64%)
 Frame = -1

Query: 664 MDSSLDSTGRLITSRVPSFPQSKSRNGSIMQTDYPQMHTHQDFGNTGITVALSKQTQQQQ 485
           MD+ +D+T  +++SR PSFP SKS   SI Q+ Y Q                        
Sbjct: 227 MDAPIDNTWPMMSSRSPSFPASKSTENSIFQSGYAQ------------------------ 262

Query: 484 HCFFGDEFGLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLSISIPMA 305
           H FFG E+   E +KQEGQSL+P FDEWP+TR++W+ LDD+RSN+TSFSTTQLSISIPMA
Sbjct: 263 HSFFGGEYASGETLKQEGQSLQPLFDEWPRTRESWTGLDDERSNQTSFSTTQLSISIPMA 322


>ref|XP_002520086.1| conserved hypothetical protein [Ricinus communis]
           gi|223540850|gb|EEF42410.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 259

 Score =  114 bits (284), Expect = 2e-23
 Identities = 65/135 (48%), Positives = 77/135 (57%)
 Frame = -1

Query: 664 MDSSLDSTGRLITSRVPSFPQSKSRNGSIMQTDYPQMHTHQDFGNTGITVALSKQTQQQQ 485
           MDS L++   L+ SRV +F  SKS + SI+Q  YPQ                        
Sbjct: 149 MDSQLENAWPLMQSRVSTFNVSKSTDNSILQNGYPQSS---------------------- 186

Query: 484 HCFFGDEFGLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLSISIPMA 305
             +F  EFG  E VKQ GQSLRPF DEWPKTRD+WS L+DDRSN TSFSTT+LSIS PMA
Sbjct: 187 --YFSGEFGTGESVKQGGQSLRPFLDEWPKTRDSWSGLEDDRSNPTSFSTTRLSISTPMA 244

Query: 304 XXXXXXXXXXSPNDD 260
                     SP+D+
Sbjct: 245 SSDLSTPSSRSPHDN 259


>ref|XP_003539001.1| PREDICTED: uncharacterized protein LOC100787567 [Glycine max]
          Length = 341

 Score =  109 bits (272), Expect = 5e-22
 Identities = 56/120 (46%), Positives = 77/120 (64%)
 Frame = -1

Query: 664 MDSSLDSTGRLITSRVPSFPQSKSRNGSIMQTDYPQMHTHQDFGNTGITVALSKQTQQQQ 485
           M+S L++T  L+++RV SF  SKS N S++ +DYP+                        
Sbjct: 226 MESQLENTWPLMSTRVASFSTSKSSNDSLLHSDYPR------------------------ 261

Query: 484 HCFFGDEFGLAEPVKQEGQSLRPFFDEWPKTRDAWSDLDDDRSNRTSFSTTQLSISIPMA 305
           H F   E+   E VK+EGQ LRPFF+EWPK+R++WS L+D+RSN+T+FSTTQLSISIPM+
Sbjct: 262 HSFLSGEYVSGEHVKEEGQPLRPFFNEWPKSRESWSGLEDERSNQTAFSTTQLSISIPMS 321


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