BLASTX nr result

ID: Coptis24_contig00022790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022790
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273638.1| PREDICTED: casparian strip membrane protein ...   116   2e-24
sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane p...   114   8e-24
sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane p...   113   1e-23
ref|XP_002276085.1| PREDICTED: casparian strip membrane protein ...   110   9e-23
sp|P0DI31.1|CASP2_TRIPD RecName: Full=Casparian strip membrane p...   109   3e-22

>ref|XP_002273638.1| PREDICTED: casparian strip membrane protein VIT_06s0080g00840
           [Vitis vinifera] gi|226713612|sp|A7QF77.1|CASP1_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_06s0080g00840 gi|296084880|emb|CBI28289.3| unnamed
           protein product [Vitis vinifera]
          Length = 201

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/84 (67%), Positives = 65/84 (77%)
 Frame = -3

Query: 254 SKVIKHEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDL 75
           +K I+H K G KRG+AIFDFILR+          T MGTTDQTLPF TQFFQF+ASYDDL
Sbjct: 26  TKAIQHPKAGLKRGLAIFDFILRLSAIGAALAATTTMGTTDQTLPFFTQFFQFQASYDDL 85

Query: 74  PAFTFFVVANAIVTAYLVLSLPFS 3
           PAF+FFV+ANAI + YL LSLPFS
Sbjct: 86  PAFSFFVIANAIASGYLFLSLPFS 109


>sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane protein 3
          Length = 207

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/79 (70%), Positives = 61/79 (77%)
 Frame = -3

Query: 239 HEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDLPAFTF 60
           H++ G KRGVAIFDFILRI            MGTTDQTLPF TQFFQF+ASYDDLP FTF
Sbjct: 37  HKRGGMKRGVAIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQASYDDLPTFTF 96

Query: 59  FVVANAIVTAYLVLSLPFS 3
           FV+ANAI + YLVLSLPFS
Sbjct: 97  FVIANAIASGYLVLSLPFS 115


>sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane protein 1
          Length = 208

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/75 (73%), Positives = 59/75 (78%)
 Frame = -3

Query: 227 GWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDLPAFTFFVVA 48
           GW+RGV+IFDFILRI            MGTTDQTLPF TQFFQF+ASYDDLPAFTFFVVA
Sbjct: 42  GWRRGVSIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQASYDDLPAFTFFVVA 101

Query: 47  NAIVTAYLVLSLPFS 3
           N I + YLVLSLPFS
Sbjct: 102 NGIASGYLVLSLPFS 116


>ref|XP_002276085.1| PREDICTED: casparian strip membrane protein VIT_08s0007g02880
           [Vitis vinifera] gi|226713603|sp|A7PP95.1|CASP2_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_08s0007g02880 gi|297740155|emb|CBI30337.3| unnamed
           protein product [Vitis vinifera]
          Length = 209

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/84 (63%), Positives = 62/84 (73%)
 Frame = -3

Query: 254 SKVIKHEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDL 75
           +K   H   GWK+G+AIFDF+LR+         AT MGTTD+TLPF TQFFQF+AS+DDL
Sbjct: 34  TKATPHPNAGWKKGLAIFDFLLRLAAIAATLAAATTMGTTDETLPFFTQFFQFQASFDDL 93

Query: 74  PAFTFFVVANAIVTAYLVLSLPFS 3
           PAF FFVVA AI + YL LSLPFS
Sbjct: 94  PAFMFFVVATAIASGYLALSLPFS 117


>sp|P0DI31.1|CASP2_TRIPD RecName: Full=Casparian strip membrane protein 2
          Length = 202

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/82 (67%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 IKHEKR-GWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKASYDDLPA 69
           + HE+  G+KRGVAIFD ILRI           VMGTT+QTLPF TQFFQF+ASYDDLP 
Sbjct: 29  VHHERAAGYKRGVAIFDLILRISAATAALAATIVMGTTEQTLPFFTQFFQFRASYDDLPT 88

Query: 68  FTFFVVANAIVTAYLVLSLPFS 3
           FTFFV+A AIVT YL+LS+PFS
Sbjct: 89  FTFFVIAMAIVTGYLILSVPFS 110


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