BLASTX nr result

ID: Coptis24_contig00022785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022785
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
gb|ABK94819.1| unknown [Populus trichocarpa]                          120   1e-25
ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4...   115   4e-24
ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ric...   115   5e-24
ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24

>ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|222841842|gb|EEE79389.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/72 (79%), Positives = 64/72 (88%)
 Frame = +3

Query: 3   SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGL 182
           S K + S D   ES++KIRADR+MRLMA+AANVADFIIA+ADIEPNP CNHAVTLG+SGL
Sbjct: 156 SSKEDTSKDAT-ESLRKIRADRVMRLMAVAANVADFIIALADIEPNPFCNHAVTLGVSGL 214

Query: 183 VSAWAGWYRNWP 218
           VSAWAGWYRNWP
Sbjct: 215 VSAWAGWYRNWP 226


>gb|ABK94819.1| unknown [Populus trichocarpa]
          Length = 227

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/72 (79%), Positives = 64/72 (88%)
 Frame = +3

Query: 3   SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGL 182
           S K + S D   ES++KIRADR+MRLMA+AANVADFIIA+ADIEPNP CNHAVTLG+SGL
Sbjct: 156 SSKEDTSKDAT-ESLRKIRADRVMRLMAVAANVADFIIALADIEPNPFCNHAVTLGVSGL 214

Query: 183 VSAWAGWYRNWP 218
           VSAWAGWYRNWP
Sbjct: 215 VSAWAGWYRNWP 226


>ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4-like [Cucumis sativus]
           gi|449516001|ref|XP_004165036.1| PREDICTED: peroxisomal
           membrane protein 11-4-like [Cucumis sativus]
          Length = 227

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/72 (70%), Positives = 61/72 (84%)
 Frame = +3

Query: 3   SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGL 182
           S K +  +D + ESI KI++DR+MRLMA+AANVAD II +A+IEPNP CNH +TLGISGL
Sbjct: 155 SSKEDSKEDSKEESINKIKSDRIMRLMAVAANVADLIIGLAEIEPNPFCNHTITLGISGL 214

Query: 183 VSAWAGWYRNWP 218
           VSAWAGWYRNWP
Sbjct: 215 VSAWAGWYRNWP 226


>ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ricinus communis]
           gi|223550071|gb|EEF51558.1| peroxisomal biogenesis
           factor, putative [Ricinus communis]
          Length = 226

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/66 (80%), Positives = 61/66 (92%), Gaps = 1/66 (1%)
 Frame = +3

Query: 24  DDKQL-ESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGLVSAWAG 200
           D K++ E+IKKIRADR+MRLMA+AAN+AD IIA+A+IEPNP CNH VTLGISGLVSAWAG
Sbjct: 160 DPKEVQENIKKIRADRVMRLMAVAANIADLIIALAEIEPNPFCNHTVTLGISGLVSAWAG 219

Query: 201 WYRNWP 218
           WYRNWP
Sbjct: 220 WYRNWP 225


>ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|222834122|gb|EEE72599.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/72 (76%), Positives = 63/72 (87%)
 Frame = +3

Query: 3   SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGL 182
           S K + S+D + ES +KIR +R+MRLMA+AANVAD IIA+ADIEPNP CNHAVTLGISGL
Sbjct: 156 SSKEDGSEDAK-ESTRKIRVERVMRLMAVAANVADLIIALADIEPNPFCNHAVTLGISGL 214

Query: 183 VSAWAGWYRNWP 218
           VSAWAGWYRNWP
Sbjct: 215 VSAWAGWYRNWP 226


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