BLASTX nr result
ID: Coptis24_contig00022785
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00022785 (388 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|2... 120 1e-25 gb|ABK94819.1| unknown [Populus trichocarpa] 120 1e-25 ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4... 115 4e-24 ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ric... 115 5e-24 ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-24 >ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|222841842|gb|EEE79389.1| predicted protein [Populus trichocarpa] Length = 227 Score = 120 bits (301), Expect = 1e-25 Identities = 57/72 (79%), Positives = 64/72 (88%) Frame = +3 Query: 3 SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGL 182 S K + S D ES++KIRADR+MRLMA+AANVADFIIA+ADIEPNP CNHAVTLG+SGL Sbjct: 156 SSKEDTSKDAT-ESLRKIRADRVMRLMAVAANVADFIIALADIEPNPFCNHAVTLGVSGL 214 Query: 183 VSAWAGWYRNWP 218 VSAWAGWYRNWP Sbjct: 215 VSAWAGWYRNWP 226 >gb|ABK94819.1| unknown [Populus trichocarpa] Length = 227 Score = 120 bits (301), Expect = 1e-25 Identities = 57/72 (79%), Positives = 64/72 (88%) Frame = +3 Query: 3 SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGL 182 S K + S D ES++KIRADR+MRLMA+AANVADFIIA+ADIEPNP CNHAVTLG+SGL Sbjct: 156 SSKEDTSKDAT-ESLRKIRADRVMRLMAVAANVADFIIALADIEPNPFCNHAVTLGVSGL 214 Query: 183 VSAWAGWYRNWP 218 VSAWAGWYRNWP Sbjct: 215 VSAWAGWYRNWP 226 >ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4-like [Cucumis sativus] gi|449516001|ref|XP_004165036.1| PREDICTED: peroxisomal membrane protein 11-4-like [Cucumis sativus] Length = 227 Score = 115 bits (288), Expect = 4e-24 Identities = 51/72 (70%), Positives = 61/72 (84%) Frame = +3 Query: 3 SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGL 182 S K + +D + ESI KI++DR+MRLMA+AANVAD II +A+IEPNP CNH +TLGISGL Sbjct: 155 SSKEDSKEDSKEESINKIKSDRIMRLMAVAANVADLIIGLAEIEPNPFCNHTITLGISGL 214 Query: 183 VSAWAGWYRNWP 218 VSAWAGWYRNWP Sbjct: 215 VSAWAGWYRNWP 226 >ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ricinus communis] gi|223550071|gb|EEF51558.1| peroxisomal biogenesis factor, putative [Ricinus communis] Length = 226 Score = 115 bits (287), Expect = 5e-24 Identities = 53/66 (80%), Positives = 61/66 (92%), Gaps = 1/66 (1%) Frame = +3 Query: 24 DDKQL-ESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGLVSAWAG 200 D K++ E+IKKIRADR+MRLMA+AAN+AD IIA+A+IEPNP CNH VTLGISGLVSAWAG Sbjct: 160 DPKEVQENIKKIRADRVMRLMAVAANIADLIIALAEIEPNPFCNHTVTLGISGLVSAWAG 219 Query: 201 WYRNWP 218 WYRNWP Sbjct: 220 WYRNWP 225 >ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|222834122|gb|EEE72599.1| predicted protein [Populus trichocarpa] Length = 227 Score = 115 bits (287), Expect = 5e-24 Identities = 55/72 (76%), Positives = 63/72 (87%) Frame = +3 Query: 3 SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVADIEPNPICNHAVTLGISGL 182 S K + S+D + ES +KIR +R+MRLMA+AANVAD IIA+ADIEPNP CNHAVTLGISGL Sbjct: 156 SSKEDGSEDAK-ESTRKIRVERVMRLMAVAANVADLIIALADIEPNPFCNHAVTLGISGL 214 Query: 183 VSAWAGWYRNWP 218 VSAWAGWYRNWP Sbjct: 215 VSAWAGWYRNWP 226