BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022784
         (1363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   160   5e-37
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   157   5e-36
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   152   3e-34
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...   152   3e-34

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  160 bits (406), Expect = 5e-37
 Identities = 133/415 (32%), Positives = 188/415 (45%), Gaps = 19/415 (4%)
 Frame = -2

Query: 1251 WSELLFDLAHEIQERLAL-DDLIRFSSVCSFWNSLSGSFLRH-KGRLPWLIVPYYVDPNV 1078
            WS+L  +L   I + L +  D +   +VC  W         H   +LPWL++P       
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLP------- 57

Query: 1077 GRDPNYCSDGILGFFSILDGLTYKLEIPELVGR-RICGTAFGWFITVHGNSEMQLLHPFT 901
             +  +  +     FFS+     + L +PE+  R R CG++ GW + +     + L++P T
Sbjct: 58   -QSQSQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLT 116

Query: 900  RKVVQLPALTEFPYSVGTRFSEEKGLLYQLQERLDDTENTYEVNSDYMRDFHIYKAVTSP 721
            R  + LP L+ FP  +   +S+  G  Y L+  L +      V+   MRD  I K V S 
Sbjct: 117  RAKLSLPPLSSFPNVISFNYSDI-GREYALRNLLGERVT---VSLRQMRDSFIRKVVLSS 172

Query: 720  GLTNSSQPTVVIAIPMVYRQLYFCRPGKDSKWKRVIGKTVIYSDVTLYKGDFYAVRHTGE 541
                 +   VVIAI      L +CR G D  W  V        DV    G FYAV   G+
Sbjct: 173  SPLKDNN-FVVIAILNQTDDLAYCRNG-DKSWSLVENARSFCEDVIFVNGMFYAVNKAGQ 230

Query: 540  VDVVKNLDDADGSSVPTTSFVISATKDYDVNAENNYLVESSNELLLVIRIL--------A 385
            + +     D+     P  SF+ +  +      +  YLV S +ELLLV R L         
Sbjct: 231  IVICDISSDS-----PRVSFMETPRQ---AGGDMQYLVNSGDELLLVTRYLDLEYEFDHP 282

Query: 384  DFEGKSYRFTRKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFTGCKRNCIY 205
            D E      T +F V +LD++GP W+ +  LGD ALF+G N+S S+ A+DF+GC  NCIY
Sbjct: 283  DMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIY 342

Query: 204  XXXXXXXXXFTG----HDKGIFYLDTCTIEKICPIDSKFVSP----RPLWYSINP 64
                     + G    HD GIF L   TIE +      F SP     PLW S NP
Sbjct: 343  YTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNP 397


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  157 bits (398), Expect = 5e-36
 Identities = 128/436 (29%), Positives = 205/436 (47%), Gaps = 38/436 (8%)
 Frame = -2

Query: 1257 SGWSELLFDLAHEI-QERLALDDLIRFSSVC-SFWNSLSGSFLRHKGRLPWLIVPYYVDP 1084
            S WSEL  +L   I Q++    D I   +VC S+W+++         +LPWL++PY+ + 
Sbjct: 2    SNWSELPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKN- 60

Query: 1083 NVGRDPNYCSDGILGFFSILDGLTYKLEIPELVGRRICGTAFGWFITVHGNSEMQLLHPF 904
                +PN+      GF+++ DG TY LE+PE + +R CG++ GW + V     + LL+P 
Sbjct: 61   ----NPNH-----RGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPL 111

Query: 903  TRKVVQLPALTEFPYSVGTRFSEEKGLLYQLQERLDDTENTYEVNSDYMRDFHIYKAVTS 724
            T+  ++LP+L+ FPY     F  E  ++Y+    +++  NT       +R+ +I KA+ S
Sbjct: 112  TKARIELPSLSTFPY-----FPTE--VVYENSRNINEYFNTKA--KLRIRETYIRKAIVS 162

Query: 723  --PGLTNSSQPTVVIAIPMVYRQLYFCRPGKDSKWKRV--IGKTVIYSDVTLYKGDFYAV 556
              P   N +   +   I      + FC+ G D+ W  +    + + Y DV  ++G FYAV
Sbjct: 163  EDPSTGNFAVMAIYKTINST-ENIAFCKSG-DATWFTIQETSQKIHYQDVMFHRGKFYAV 220

Query: 555  RHTGEVDVVKNLDDADGSSV-----PTTSFVISATKDYDVNAENNYLVESSNELLLVIRI 391
               G V +   + D +  SV     P     +   K +       YL     +L+L  R 
Sbjct: 221  DDKGRVSIC--ITDINPPSVIQVADPPPVPPLMGYKQW-------YLASLDEDLILAGR- 270

Query: 390  LADFEGKSYRF-TRKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFTGCKRN 214
               + G  Y + T KF+V KLD S  NW+E+  LGD   F+G+N   S+   ++     N
Sbjct: 271  FRKYRGSGYEYQTHKFMVYKLDASSSNWLELDGLGDMLSFLGWNCFHSISTQNYRNYSGN 330

Query: 213  CIY----XXXXXXXXXFTGHDKGIFYLDTCTIEKI--------CPI-------------- 112
            CIY             + GHD GIF LD  +++++         PI              
Sbjct: 331  CIYFTDDKFIVGSDFPWEGHDYGIFNLDDKSVQRLGLPSYPIKLPILPFIYGYERSLKRD 390

Query: 111  DSKFVSPRPLWYSINP 64
             S F+ P P+W +INP
Sbjct: 391  RSSFILPPPIWVTINP 406


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  152 bits (384), Expect = 2e-34
 Identities = 128/411 (31%), Positives = 193/411 (46%), Gaps = 15/411 (3%)
 Frame = -2

Query: 1251 WSELLFDLAHEIQERLAL-DDLIRFSSVCSFWNSLSGSFLRH-KGRLPWLIVPYYVDPNV 1078
            W++L  +L   I +++ +  D + F +VC  W S       H   +LPWL++P     + 
Sbjct: 5    WTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQ----SQ 60

Query: 1077 GRDPNYCSDGILGFFSILDGLTYKLEIPELVGRRI-CGTAFGWFITVHGNSEMQLLHPFT 901
                +Y +     FF++     + L +PE   R+  CG++ GW I +  +  + +++P T
Sbjct: 61   SNQSSYRA-----FFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLT 115

Query: 900  RKVVQLPALTEFPYSVGTRFSEEKGLLYQLQERLDDTENTYEVNSDYMRDFHIYKAVTSP 721
            R+ + LPA++ FP  V   ++   G  Y L     +  NT  +    MRD  I K V S 
Sbjct: 116  RRKIHLPAISSFPNVVSFDYANV-GREYLLVNPQGE-RNTASLRQ--MRDGFIKKVVMSS 171

Query: 720  G-LTNSSQPTVVIAIPMVYRQLYFCRPGKDSKWKRVIGKTVIYSDVTLYKGDFYAVRHTG 544
              L       V +AI      L +C+ G D  W  V        DV  + G FYAV   G
Sbjct: 172  SPLEKKGDFFVAMAILCSTGDLAYCKNG-DECWNIVENSRSFSEDVIYFNGLFYAVNKAG 230

Query: 543  EVDVVKNLDDADGSSVPTTSFVISATKDYDVNAENNYLVESSNELLLVIRIL---ADFEG 373
            ++ V     D +G+S P  SF+ +  +   +  +  YLV S + LLLV R L    +F+ 
Sbjct: 231  QIVVC----DVNGNS-PKVSFIETPRQ---IGGDMQYLVSSGDGLLLVTRYLDLDVEFDI 282

Query: 372  KSYRFTRKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFTGCKRNCIYXXXX 193
              Y+ T +F V KLD +GP W  V  LGD  LF+G N+S ++ AS  +GC  +CIY    
Sbjct: 283  FIYK-TARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDD 341

Query: 192  XXXXXFTG----HDKGIFYLDTCTIEKICPID----SKFVSPRPLWYSINP 64
                 + G    HD GIF L   +IE +        S+   P PLW S NP
Sbjct: 342  YSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPNP 392


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  152 bits (383), Expect = 3e-34
 Identities = 135/410 (32%), Positives = 181/410 (44%), Gaps = 14/410 (3%)
 Frame = -2

Query: 1251 WSELLFDLAHEIQERLAL-DDLIRFSSVCSFWNSLSGSFLRH-KGRLPWLIVPYYVDPNV 1078
            WS+L  +L   I ++  +  D +RF +VC  W +       H   +LPWL++P     + 
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 1077 GRDPNYCSDGILGFFSILDGLTYKLEIPELVGRRIC-GTAFGWFITVHGNSEMQLLHPFT 901
             R           FFS+     + L++PE   RR   G++ GW + +    E+ LL+P T
Sbjct: 64   HRP----------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT 113

Query: 900  RKVVQLPALTEFPYSVGTRFSEEKGLLYQLQERLDDTENTYEVNSDYMRDFHIYKAVTSP 721
            R  V LP L+ FP  V   F++  G  Y L+    D    Y  +   MRD  I K + S 
Sbjct: 114  RSKVHLPPLSTFPNVVRFNFADV-GREYALRTSSGDV---YTRSLKKMRDSFIKKTILSS 169

Query: 720  GLTNSSQPTVVIAIPMVYRQLYFCRPGKDSKWKRVIGKTVIYSDVTLYKGDFYAVRHTGE 541
               N S    V+ +      L  CR   DS W  +        DV  ++G FYAV   G 
Sbjct: 170  SPANGSDFIAVVILNQT-GDLALCRKSDDS-WTFLEDAQSYAEDVIFHRGLFYAVNKYGS 227

Query: 540  VDVVKNLDDADGSSVPTTSFVISATKDYDVNAENNYLVESSNELLLVIRIL-------AD 382
            + V     D  GSS P  S +           +  YLVES  ELLLV R L        D
Sbjct: 228  IAVC----DVSGSS-PRVSII---EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPD 279

Query: 381  FEGKSYRFTRKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFTGCKRNCIYX 202
                 YR TR F V +LD   P W  V  LGD ALF+G N S S+ + DF GCK NCIY 
Sbjct: 280  QTSLIYRTTR-FQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYY 338

Query: 201  XXXXXXXXFTG----HDKGIFYLDTCTIEKICPIDSKFVSPRPLWYSINP 64
                    + G     D GIF L+  +IE +     +   P PLW + NP
Sbjct: 339  TDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNP 388


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
            gi|223551310|gb|EEF52796.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  152 bits (383), Expect = 3e-34
 Identities = 128/436 (29%), Positives = 202/436 (46%), Gaps = 38/436 (8%)
 Frame = -2

Query: 1257 SGWSELLFDLAHEI-QERLALDDLIRFSSVC-SFWNSLSGSFLRHKGRLPWLIVPYYVDP 1084
            S WSEL  +L   I Q++    D I   +VC S+W+++         RLPWL++P++ D 
Sbjct: 2    SSWSELPQELLQTITQKQTNYVDYISTRAVCKSWWSAIPKKPHDLLCRLPWLLLPHHKD- 60

Query: 1083 NVGRDPNYCSDGILGFFSILDGLTYKLEIPELVGRRICGTAFGWFITVHGNSEMQLLHPF 904
                +PN+      GF++  DG TY LE+PE V +R CG++ GW + V     + LL+P 
Sbjct: 61   ----NPNH-----RGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPL 111

Query: 903  TRKVVQLPALTEFPYSVGTRFSEEKGLLYQLQERLDDTENTYEVNSDYMRDFHIYKAVTS 724
            T+  ++LP+L+ FP      F  E  ++YQ    L+  E     N   +R+ +I KA+ S
Sbjct: 112  TKSRIELPSLSTFP-----NFPTE--VIYQNSRNLN--EYFIRNNKLRIRETYIRKAIVS 162

Query: 723  PGLTNSSQPTVVIAIPMVY---RQLYFCRPGKDSKW-KRVIGKTVIYSDVTLYKGDFYAV 556
               +  S   +V+AI         + FC+ G  + +  +   + + Y DV  ++G FY V
Sbjct: 163  EDPSVGS--FMVMAIYKTINGSENIAFCKSGDAALFTTQETSQEIHYQDVMFHRGKFYMV 220

Query: 555  RHTGEVDVVKNLDDADGSSV-----PTTSFVISATKDYDVNAENNYLVESSNELLLVIRI 391
               G V +   + D +  SV     P    ++   K +       YL   + +L+LV R 
Sbjct: 221  NDKGRVSIC--ITDINPPSVIHVADPPPVPLLMGYKQW-------YLATLNEDLILVGR- 270

Query: 390  LADFEGKSYRF-TRKFVVIKLDFSGPNWVEVKDLGDCALFVGFNNSFSVVASDFTGCKRN 214
              ++    Y + T KF+V KLD S  NW ++  LGD   F+G+N   S+ A +   C  N
Sbjct: 271  FRNYRVSGYEYQTHKFIVYKLDSSSSNWSKLDGLGDMIFFLGWNCFDSISAHNCGNCSGN 330

Query: 213  CIY----XXXXXXXXXFTGHDKGIFYLDTCTIEKICPID--------------------- 109
            CIY             + GHD G+F  D  ++ ++ P                       
Sbjct: 331  CIYFTDDNFIVDSDFSWEGHDYGVFNFDDGSVRRLDPPSYPIKPHFLPLVFFHERSLKRD 390

Query: 108  -SKFVSPRPLWYSINP 64
             S FV P P+W +INP
Sbjct: 391  RSSFVLPPPVWVTINP 406