BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022780
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   161   4e-38
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              161   4e-38
ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   161   6e-38
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   159   3e-37
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        159   3e-37

>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/79 (92%), Positives = 76/79 (96%)
 Frame = -1

Query: 242 LRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRVDFEQTTGKPYKMRRPEGLDVQKGSVLS 63
           LRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD E TTGKPYKMRRPEGLDVQKGSVLS
Sbjct: 354 LRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLS 413

Query: 62  KVPLLHLHCRELVLPNIAK 6
           KVPLLHLHCREL+LPNIAK
Sbjct: 414 KVPLLHLHCRELILPNIAK 432


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/79 (92%), Positives = 76/79 (96%)
 Frame = -1

Query: 242 LRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRVDFEQTTGKPYKMRRPEGLDVQKGSVLS 63
           LRVHCAEALGTPIVGDYKYGW+VH +WKQMPRVD E TTGKPYKMRRPEGLDVQKGSVLS
Sbjct: 356 LRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLS 415

Query: 62  KVPLLHLHCRELVLPNIAK 6
           KVPLLHLHCREL+LPNIAK
Sbjct: 416 KVPLLHLHCRELILPNIAK 434


>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
           max]
          Length = 554

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/79 (92%), Positives = 76/79 (96%)
 Frame = -1

Query: 242 LRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRVDFEQTTGKPYKMRRPEGLDVQKGSVLS 63
           LRVHCAEALGTPIVGDYKYGW+VHS+WKQMPRVD E TTGKPYK+RRPEGLDVQKGSVLS
Sbjct: 431 LRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLS 490

Query: 62  KVPLLHLHCRELVLPNIAK 6
           KVPLLHLHCRELVLPNI K
Sbjct: 491 KVPLLHLHCRELVLPNIVK 509


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  159 bits (401), Expect = 3e-37
 Identities = 71/79 (89%), Positives = 76/79 (96%)
 Frame = -1

Query: 242 LRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRVDFEQTTGKPYKMRRPEGLDVQKGSVLS 63
           LRVHCAEALGTPIVGDYKYGW+VH +WKQMP+VD E TTGKPYK+RRPEGLDVQKGSVLS
Sbjct: 367 LRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLS 426

Query: 62  KVPLLHLHCRELVLPNIAK 6
           KVPLLHLHCRE+VLPNIAK
Sbjct: 427 KVPLLHLHCREMVLPNIAK 445


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  159 bits (401), Expect = 3e-37
 Identities = 71/79 (89%), Positives = 76/79 (96%)
 Frame = -1

Query: 242 LRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRVDFEQTTGKPYKMRRPEGLDVQKGSVLS 63
           LRVHCAEALGTPIVGDYKYGW+VH +WKQMP+VD E TTGKPYK+RRPEGLDVQKGSVLS
Sbjct: 202 LRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLS 261

Query: 62  KVPLLHLHCRELVLPNIAK 6
           KVPLLHLHCRE+VLPNIAK
Sbjct: 262 KVPLLHLHCREMVLPNIAK 280