BLASTX nr result

ID: Coptis24_contig00022769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022769
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19107.3| unnamed protein product [Vitis vinifera]              127   3e-27
ref|XP_002284285.1| PREDICTED: LL-diaminopimelate aminotransfera...   127   3e-27
ref|XP_002268766.1| PREDICTED: LL-diaminopimelate aminotransfera...   117   2e-24
ref|XP_002534257.1| Aspartate aminotransferase, putative [Ricinu...   116   6e-24
ref|XP_002523910.1| Aspartate aminotransferase, putative [Ricinu...   111   2e-22

>emb|CBI19107.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  127 bits (318), Expect = 3e-27
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = -2

Query: 350 SKVPRNMNMERLRNEYLFAKICELEFEHIQKHPDAKLISLGVGDTTEPIPDIITLAMAEH 171
           +KVPRN+NMERLRN YLF++IC  E EH QK+P AKLI LG+GDTTEPIPDIIT AMAEH
Sbjct: 59  TKVPRNINMERLRNGYLFSEICRRELEHTQKYPHAKLIKLGIGDTTEPIPDIITSAMAEH 118

Query: 170 SRSLSTAKGYKGYGTEQGN 114
           + +LST +GY+GYG EQGN
Sbjct: 119 AHALSTIRGYRGYGAEQGN 137


>ref|XP_002284285.1| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like
           [Vitis vinifera]
          Length = 485

 Score =  127 bits (318), Expect = 3e-27
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = -2

Query: 350 SKVPRNMNMERLRNEYLFAKICELEFEHIQKHPDAKLISLGVGDTTEPIPDIITLAMAEH 171
           +KVPRN+NMERLRN YLF++IC  E EH QK+P AKLI LG+GDTTEPIPDIIT AMAEH
Sbjct: 81  TKVPRNINMERLRNGYLFSEICRRELEHTQKYPHAKLIKLGIGDTTEPIPDIITSAMAEH 140

Query: 170 SRSLSTAKGYKGYGTEQGN 114
           + +LST +GY+GYG EQGN
Sbjct: 141 AHALSTIRGYRGYGAEQGN 159


>ref|XP_002268766.1| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic
           [Vitis vinifera] gi|296081525|emb|CBI20048.3| unnamed
           protein product [Vitis vinifera]
          Length = 440

 Score =  117 bits (294), Expect = 2e-24
 Identities = 61/124 (49%), Positives = 85/124 (68%)
 Frame = -2

Query: 482 QLASSFCMGPALLLPGSMQTSLFFLEERLVASPTGKRSIRTVCRSKVPRNMNMERLRNEY 303
           +L++   M PA+ L   M  +   ++E  +           VC ++V RN+NME+LRN Y
Sbjct: 3   KLSTFSSMPPAIFLQPRMSHASLKVQEDGIG----------VC-TRVTRNLNMEKLRNGY 51

Query: 302 LFAKICELEFEHIQKHPDAKLISLGVGDTTEPIPDIITLAMAEHSRSLSTAKGYKGYGTE 123
           LF +I   E EH++K+P+AK+ISLG+GDTTEPIPDI+T +MA H+R LST +GY+GYG E
Sbjct: 52  LFPEIAMRELEHMKKYPNAKVISLGIGDTTEPIPDIVTSSMANHARRLSTVEGYRGYGAE 111

Query: 122 QGNK 111
           QGNK
Sbjct: 112 QGNK 115


>ref|XP_002534257.1| Aspartate aminotransferase, putative [Ricinus communis]
           gi|223525633|gb|EEF28127.1| Aspartate aminotransferase,
           putative [Ricinus communis]
          Length = 440

 Score =  116 bits (290), Expect = 6e-24
 Identities = 52/83 (62%), Positives = 70/83 (84%)
 Frame = -2

Query: 359 VCRSKVPRNMNMERLRNEYLFAKICELEFEHIQKHPDAKLISLGVGDTTEPIPDIITLAM 180
           V  +KVPRN+NME+LRN YLF +I   +  H++K PDAKL+SLG+GDTT+P+PDII+L+M
Sbjct: 33  VFHTKVPRNVNMEKLRNGYLFPEISIRQIGHLEKFPDAKLLSLGIGDTTQPLPDIISLSM 92

Query: 179 AEHSRSLSTAKGYKGYGTEQGNK 111
            E++R+LST +GY+GYG EQGNK
Sbjct: 93  EEYARALSTLEGYRGYGAEQGNK 115


>ref|XP_002523910.1| Aspartate aminotransferase, putative [Ricinus communis]
           gi|223536840|gb|EEF38479.1| Aspartate aminotransferase,
           putative [Ricinus communis]
          Length = 563

 Score =  111 bits (277), Expect = 2e-22
 Identities = 51/79 (64%), Positives = 64/79 (81%)
 Frame = -2

Query: 350 SKVPRNMNMERLRNEYLFAKICELEFEHIQKHPDAKLISLGVGDTTEPIPDIITLAMAEH 171
           ++VPRN+NME L + YLF+KI   E+EH+QK P A+LI LG+GDTT+PIP+IIT  MAEH
Sbjct: 159 TQVPRNVNMENLPSGYLFSKIIRAEYEHMQKKPHARLIKLGMGDTTQPIPEIITSTMAEH 218

Query: 170 SRSLSTAKGYKGYGTEQGN 114
           +  LST +GYKGYG EQGN
Sbjct: 219 AYGLSTLQGYKGYGAEQGN 237


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