BLASTX nr result

ID: Coptis24_contig00022752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022752
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619090.1| CCP [Medicago truncatula] gi|355494105|gb|AE...    99   4e-19
ref|XP_003623235.1| Receptor kinase-like protein [Medicago trunc...    97   1e-18
ref|XP_003628785.1| Receptor protein kinase-like protein [Medica...    97   2e-18
ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
gb|ABA99894.1| Leucine Rich Repeat family protein [Oryza sativa ...    93   3e-17

>ref|XP_003619090.1| CCP [Medicago truncatula] gi|355494105|gb|AES75308.1| CCP [Medicago
           truncatula]
          Length = 1027

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
 Frame = +3

Query: 6   ITNMSKLYYLNLSKNRFEGSIASSLDN-QILQTLDLSYNNLIGPIPKQEIGLSSRLVTLD 182
           I N+S+LYYL L+ N F+GSI  S+ N Q LQ+LDLS+N L G IP + + L S  + L+
Sbjct: 448 IGNLSQLYYLELNHNMFQGSIPPSIGNCQNLQSLDLSHNKLRGTIPVEVLNLFSLSILLN 507

Query: 183 LSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSLEYLYLQR 335
           LSHNSL GS+P E+G                G+IP  +G C+SLEY++LQR
Sbjct: 508 LSHNSLSGSLPREVGMLKNIEALDVSENHLSGDIPREIGECTSLEYIHLQR 558


>ref|XP_003623235.1| Receptor kinase-like protein [Medicago truncatula]
           gi|355498250|gb|AES79453.1| Receptor kinase-like protein
           [Medicago truncatula]
          Length = 1003

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   SITNMSKLYYLNLSKNRFEGSIASSLDN-QILQTLDLSYNNLIGPIPKQEIGLSSRLVTL 179
           SI N+++L  L ++ N FEGSI +SL+N Q L  L+LS+N L G IP+Q   LSS  + L
Sbjct: 423 SIGNLTRLTKLLIADNNFEGSIPTSLENCQRLLMLNLSHNMLNGSIPRQVFALSSLSIYL 482

Query: 180 DLSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSLEYLYLQ 332
           DLSHNSL GS+PFEIG+               G IPS++GSC SLE+L++Q
Sbjct: 483 DLSHNSLTGSLPFEIGKLVNLANLDLSKNKLSGMIPSSIGSCVSLEWLHMQ 533



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
 Frame = +3

Query: 6   ITNMSKLYYLNLSKNRFEGSIASSLDNQI-LQTLDLSYNNLIGPIPKQEIGLSSRLVTLD 182
           + N+  L +LN+S N F GSI S+L   I L  L   +NN  G IP   IG  S L  L+
Sbjct: 128 VGNLLYLQHLNISYNSFSGSIPSNLSQCIELSILSSGHNNFTGTIPTW-IGNFSSLSLLN 186

Query: 183 LSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSLEYL 323
           L+ N+L G+IP E+G+               G IP ++ + SSL +L
Sbjct: 187 LAVNNLHGTIPNEVGKLSRLTLFALNGNHLYGTIPLSVFNISSLSFL 233


>ref|XP_003628785.1| Receptor protein kinase-like protein [Medicago truncatula]
           gi|355522807|gb|AET03261.1| Receptor protein kinase-like
           protein [Medicago truncatula]
          Length = 1010

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/111 (50%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   SITNMSKLYYLNLSKNRFEGSIASSLDN-QILQTLDLSYNNLIGPIPKQEIGLSSRLVTL 179
           S+ N+SKL+ L+LS N  EGSI  S+ N Q+LQ LDLS N+LIG IP +  GL S  + L
Sbjct: 441 SLGNLSKLFKLDLSNNMLEGSIPPSIRNCQMLQYLDLSKNHLIGTIPFELFGLPSLSLLL 500

Query: 180 DLSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSLEYLYLQ 332
           +LSHNS  GS+P EIG+               GEIP  +G C SLEYL LQ
Sbjct: 501 NLSHNSFKGSLPSEIGKLKSIDKLDASENVLSGEIPEEIGKCISLEYLNLQ 551



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   SITNMSKLYYLNLSKNRFEGSIASSLDN--QILQTLDLSYNNLIGPIPKQEIGLSSRLVT 176
           S+TN + L  L+L+ N F GS+  S+ N    L   D+S+N + G +P + +G    L+ 
Sbjct: 344 SLTNCTNLRVLHLNLNNFGGSLPKSVANLSSQLNQFDISHNKITGTVP-EGLGNIINLIG 402

Query: 177 LDLSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSL 314
           +++  N L GSIP   G+                EIPS+LG+ S L
Sbjct: 403 INMKFNLLTGSIPASFGKLQKIQSLTLNVNKLSAEIPSSLGNLSKL 448



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 41/109 (37%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
 Frame = +3

Query: 6   ITNMSKLYYLNLSKNRFEGSIASSLDNQI-LQTLDLSYNNLIGPIPKQEIGLSSRLVTLD 182
           I N++ L Y+NL  N F G I   L     L+ L L+ N L G IP   +   S L  L 
Sbjct: 98  IGNLTFLRYVNLQNNSFYGEIPRELGQLFWLEDLYLTNNTLRGQIPAV-LSNCSELKILS 156

Query: 183 LSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSLEYLYL 329
           L+ N L G IP E+G                GEIPS +G+ SSL  L L
Sbjct: 157 LTGNKLVGKIPLELGFLTKLEVLSIGMNNLTGEIPSFIGNLSSLSILIL 205


>ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|222865436|gb|EEF02567.1|
           predicted protein [Populus trichocarpa]
          Length = 1006

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   SITNMSKLYYLNLSKNRFEGSIASSLDN-QILQTLDLSYNNLIGPIPKQEIGLSSRLVTL 179
           S+ N++ L  L LS N  +G I SSL N Q L +L L+ NNL GP+ KQ IG++S  V+L
Sbjct: 419 SLGNVTSLVELYLSANNLQGGIPSSLANCQNLMSLKLAQNNLSGPLTKQVIGMASLSVSL 478

Query: 180 DLSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSLEYLYLQ 332
           DLSHN L G +P E+GR               GEIP +LGSC  LEYL+L+
Sbjct: 479 DLSHNQLIGPLPSEVGRLVNLGYLDVSHNRLSGEIPGSLGSCIMLEYLHLE 529


>gb|ABA99894.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
          Length = 1054

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
 Frame = +3

Query: 6   ITNMSKLYYLNLSKNRFEGSIASSLDNQI-LQTLDLSYNNLIGPIPKQEIGLSSRLVTLD 182
           + N+SKL +L+LS+N  EGSI  S +    +  LDLSYN   G +PKQ + LSS  + L+
Sbjct: 474 VANLSKLAFLDLSENDMEGSIPLSFERMSSIAILDLSYNQFSGMLPKQVLSLSSLTLFLN 533

Query: 183 LSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSLEYLYLQ 332
           LSHN+  G IP E+GR               GEIP AL  C S+EYL+LQ
Sbjct: 534 LSHNTFSGPIPSEVGRLSSLGVLDLSNNRLSGEIPQALAGCQSMEYLFLQ 583



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   SITNMSKLYYLNLSKNRFEGSIASSLDN-QILQTLDLSYNNLIGPIPKQEIGLSSRLVTL 179
           S++N+S L+ LNLS NR  G I   L     ++ + L  N+LIG IP   +   +RL  L
Sbjct: 103 SLSNLSFLHTLNLSGNRLTGGIPLELGQLPRIRVISLGGNSLIGNIP-VSLTNCARLTHL 161

Query: 180 DLSHNSLDGSIPFEIGRXXXXXXXXXXXXXXVGEIPSALGSCSSLEYLYLQR 335
           +L  N L G IP                    G IP++ GS S LE+L L R
Sbjct: 162 ELPRNGLHGEIPANFSNCRELRVFNISANSLSGGIPASFGSLSKLEFLGLHR 213


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